Literature DB >> 10817866

Monitoring impact of in situ biostimulation treatment on groundwater bacterial community by DGGE.

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Abstract

Changes in bacterial diversity during the field experiment on biostimulation were monitored by denaturing gradient gel electrophoresis (DGGE) analysis of PCR-amplified 16S rDNA fragments. The results revealed that the bacterial community was disturbed after the start of treatment, continued to change for 45 days or 60 days and then formed a relatively stable community different from the original community structure. DGGE analysis of soluble methane monooxygenase (sMMO) hydroxylase gene fragments, mmoX, was performed to monitor the shifts in the numerically dominant sMMO-containing methanotrophs during the field experiment. Sequence analysis on the mmoX gene fragments from the DGGE bands implied that the biostimulation treatment caused a shift of potential dominant sMMO-containing methanotrophs from type I methanotrophs to type II methanotrophs.

Year:  2000        PMID: 10817866     DOI: 10.1111/j.1574-6941.2000.tb00707.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  42 in total

1.  Monitoring of Ralstonia eutropha KT1 in groundwater in an experimental bioaugmentation field by in situ PCR.

Authors:  Katsuji Tani; Masahiro Muneta; Kanji Nakamura; Katsutoshi Shibuya; Masao Nasu
Journal:  Appl Environ Microbiol       Date:  2002-01       Impact factor: 4.792

2.  16S ribosomal DNA-based analysis of bacterial diversity in purified water used in pharmaceutical manufacturing processes by PCR and denaturing gradient gel electrophoresis.

Authors:  Mako Kawai; Eiichi Matsutera; Hisashi Kanda; Nobuyasu Yamaguchi; Katsuji Tani; Masao Nasu
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

3.  Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis.

Authors:  Hiroyuki Sekiguchi; Masataka Watanabe; Tadaatsu Nakahara; Baohua Xu; Hiroo Uchiyama
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

4.  Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis.

Authors:  Zhongtang Yu; Mark Morrison
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

5.  Soil microbial abundance and diversity along a low precipitation gradient.

Authors:  Ami Bachar; Ashraf Al-Ashhab; M Ines M Soares; Menachem Y Sklarz; Roey Angel; Eugene D Ungar; Osnat Gillor
Journal:  Microb Ecol       Date:  2010-08-04       Impact factor: 4.552

6.  Diversity of methanotrophic bacteria in tropical upland soils under different land uses.

Authors:  Claudia Knief; Supika Vanitchung; Narumon W Harvey; Ralf Conrad; Peter F Dunfield; Amnat Chidthaisong
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

7.  Statistical analyses of complex denaturing gradient gel electrophoresis profiles.

Authors:  Gavin P Gafan; Victoria S Lucas; Graham J Roberts; Aviva Petrie; Michael Wilson; David A Spratt
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

8.  Biodegradation of high molecular weight PAHs using isolated yeast mixtures: application of meta-genomic methods for community structure analyses.

Authors:  Abd El-Latif Hesham; Sardar Khan; Yu Tao; Dong Li; Yu Zhang; Min Yang
Journal:  Environ Sci Pollut Res Int       Date:  2012-04-26       Impact factor: 4.223

9.  Identification and isolation of a Castellaniella species important during biostimulation of an acidic nitrate- and uranium-contaminated aquifer.

Authors:  Anne M Spain; Aaron D Peacock; Jonathan D Istok; Mostafa S Elshahed; Fares Z Najar; Bruce A Roe; David C White; Lee R Krumholz
Journal:  Appl Environ Microbiol       Date:  2007-06-08       Impact factor: 4.792

Review 10.  Molecular ecology techniques for the study of aerobic methanotrophs.

Authors:  Ian R McDonald; Levente Bodrossy; Yin Chen; J Colin Murrell
Journal:  Appl Environ Microbiol       Date:  2007-12-28       Impact factor: 4.792

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