Literature DB >> 10809712

Identification of a small RNA within the pdh gene cluster of Mycoplasma pneumoniae and Mycoplasma genitalium.

H W Göhlmann1, J Weiner, A Schön, R Herrmann.   

Abstract

A highly abundant and heterogeneous small RNA about 205 to 210 bases long named MP200 RNA has been identified in Mycoplasma pneumoniae. It was localized on the genome within a 319-bp-long intergenic space of the pyruvate dehydrogenase (pdh) gene cluster. A database search at the DNA level revealed the highest similarity to a sequence located within the pdh gene cluster of Mycoplasma genitalium that was also shown to be transcribed into two abundant, but smaller RNAs than the ones in Mycoplasma pneumoniae. The RNAs from both M. pneumoniae and M. genitalium have the potential to code for cysteine-rich 29- and 23-amino-acid-long peptides, but so far, these peptides have not been identified experimentally in bacterial protein extracts.

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Year:  2000        PMID： 10809712      PMCID： PMC94519          DOI： 10.1128/JB.182.11.3281-3284.2000

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  22 in total

1.  Novel small stable RNAs of Mycoplasma capricolum.

Authors:  C Ushida; A Muto
Journal:  DNA Res       Date:  1995-10-31       Impact factor: 4.458

2.  Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae.

Authors:  R Himmelreich; H Hilbert; H Plagens; E Pirkl; B C Li; R Herrmann
Journal:  Nucleic Acids Res       Date:  1996-11-15       Impact factor: 16.971

3.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

4.  Transposon mutagenesis reinforces the correlation between Mycoplasma pneumoniae cytoskeletal protein HMW2 and cytadherence.

Authors:  D C Krause; T Proft; C T Hedreyda; H Hilbert; H Plagens; R Herrmann
Journal:  J Bacteriol       Date:  1997-04       Impact factor: 3.490

5.  The minimal gene complement of Mycoplasma genitalium.

Authors:  C M Fraser; J D Gocayne; O White; M D Adams; R A Clayton; R D Fleischmann; C J Bult; A R Kerlavage; G Sutton; J M Kelley; R D Fritchman; J F Weidman; K V Small; M Sandusky; J Fuhrmann; D Nguyen; T R Utterback; D M Saudek; C A Phillips; J M Merrick; J F Tomb; B A Dougherty; K F Bott; P C Hu; T S Lucier; S N Peterson; H O Smith; C A Hutchison; J C Venter
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

6.  Transcription termination at intrinsic terminators: the role of the RNA hairpin.

Authors:  K S Wilson; P H von Hippel
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-12       Impact factor: 11.205

7.  The downstream box: an efficient and independent translation initiation signal in Escherichia coli.

Authors:  M L Sprengart; E Fuchs; A G Porter
Journal:  EMBO J       Date:  1996-02-01       Impact factor: 11.598

8.  The complete genome sequence of the gram-positive bacterium Bacillus subtilis.

Authors:  F Kunst; N Ogasawara; I Moszer; A M Albertini; G Alloni; V Azevedo; M G Bertero; P Bessières; A Bolotin; S Borchert; R Borriss; L Boursier; A Brans; M Braun; S C Brignell; S Bron; S Brouillet; C V Bruschi; B Caldwell; V Capuano; N M Carter; S K Choi; J J Cordani; I F Connerton; N J Cummings; R A Daniel; F Denziot; K M Devine; A Düsterhöft; S D Ehrlich; P T Emmerson; K D Entian; J Errington; C Fabret; E Ferrari; D Foulger; C Fritz; M Fujita; Y Fujita; S Fuma; A Galizzi; N Galleron; S Y Ghim; P Glaser; A Goffeau; E J Golightly; G Grandi; G Guiseppi; B J Guy; K Haga; J Haiech; C R Harwood; A Hènaut; H Hilbert; S Holsappel; S Hosono; M F Hullo; M Itaya; L Jones; B Joris; D Karamata; Y Kasahara; M Klaerr-Blanchard; C Klein; Y Kobayashi; P Koetter; G Koningstein; S Krogh; M Kumano; K Kurita; A Lapidus; S Lardinois; J Lauber; V Lazarevic; S M Lee; A Levine; H Liu; S Masuda; C Mauël; C Médigue; N Medina; R P Mellado; M Mizuno; D Moestl; S Nakai; M Noback; D Noone; M O'Reilly; K Ogawa; A Ogiwara; B Oudega; S H Park; V Parro; T M Pohl; D Portelle; S Porwollik; A M Prescott; E Presecan; P Pujic; B Purnelle; G Rapoport; M Rey; S Reynolds; M Rieger; C Rivolta; E Rocha; B Roche; M Rose; Y Sadaie; T Sato; E Scanlan; S Schleich; R Schroeter; F Scoffone; J Sekiguchi; A Sekowska; S J Seror; P Serror; B S Shin; B Soldo; A Sorokin; E Tacconi; T Takagi; H Takahashi; K Takemaru; M Takeuchi; A Tamakoshi; T Tanaka; P Terpstra; A Togoni; V Tosato; S Uchiyama; M Vandebol; F Vannier; A Vassarotti; A Viari; R Wambutt; H Wedler; T Weitzenegger; P Winters; A Wipat; H Yamamoto; K Yamane; K Yasumoto; K Yata; K Yoshida; H F Yoshikawa; E Zumstein; H Yoshikawa; A Danchin
Journal:  Nature       Date:  1997-11-20       Impact factor: 49.962

9.  Identification and analysis of the genes coding for the putative pyruvate dehydrogenase enzyme complex in Acholeplasma laidlawii.

Authors:  P Wallbrandt; V Tegman; B H Jonsson; A Wieslander
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

10.  Codon reading scheme in Mycoplasma pneumoniae revealed by the analysis of the complete set of tRNA genes.

Authors:  P Simoneau; C M Li; S Loechel; R Wenzel; R Herrmann; P C Hu
Journal:  Nucleic Acids Res       Date:  1993-10-25       Impact factor: 16.971
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  4 in total

1.  A computational approach to identify genes for functional RNAs in genomic sequences.

Authors:  R J Carter; I Dubchak; S R Holbrook
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

2.  Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.

Authors:  T Dandekar; M Huynen; J T Regula; B Ueberle; C U Zimmermann; M A Andrade; T Doerks; L Sánchez-Pulido; B Snel; M Suyama; Y P Yuan; R Herrmann; P Bork
Journal:  Nucleic Acids Res       Date:  2000-09-01       Impact factor: 16.971

3.  Transcription in Mycoplasma pneumoniae.

Authors:  J Weiner; R Herrmann; G F Browning
Journal:  Nucleic Acids Res       Date:  2000-11-15       Impact factor: 16.971

4.  Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021.

Authors:  Vincent M Ulvé; Emeric W Sevin; Angélique Chéron; Frédérique Barloy-Hubler
Journal:  BMC Genomics       Date:  2007-12-19       Impact factor: 3.969
  4 in total

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