Literature DB >> 10804235

Development of an Argopecten-Specific 18S rRNA Targeted Genetic Probe.

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Abstract

Comparison of 18S ribosomal RNA gene sequences between diverse bivalve species, including eight scallop species, allowed the design of an 18S rRNA targeted oligonucleotide probe (BS-1364) that was specific for scallops belonging to the genus Argopecten (bay and calico scallops). The high sequence similarity of the 18S rRNA gene between Argopecten irradians and Argopecten gibbus (98.8%) prevented the design of an A. irradians species-specific probe. Hybridization studies using amplified 18S rDNA from a diverse collection of bivalve species demonstrated that the specificity of the digoxygenin-labeled probe was consistent with the predicted specificity indicated by sequence comparison. Hybridization studies using laboratory-spawned bay scallop veligers indicated that a single veliger could be detected by probe hybridization in a blot format, and that probe hybridization signal was proportional (r(2) =.99) to the abundance of veligers. Methods for rRNA extraction and blotting were developed that allowed bay scallop veligers to be specifically and quantitatively identified in natural plankton samples. Preliminary studies conducted in Tampa Bay, Florida, suggest that introduced scallops can successfully spawn and produce veligers under in situ conditions. The Argopecten-specific probe and methods developed in this study provide the means to study the production and fate of bay scallop larvae in nature and provide evidence that scallops introduced into Tampa Bay have the potential for successful reproduction and enhancement of scallop stocks.

Entities:  

Year:  2000        PMID: 10804235     DOI: 10.1007/s101269900003

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  3 in total

1.  Identification of Mytilus spp. and Pecten maximus in Irish waters by standard PCR of the 18S rDNA gene and multiplex PCR of the 16S rDNA gene.

Authors:  Ivan F Bendezu; John W Slater; Brian F Carney
Journal:  Mar Biotechnol (NY)       Date:  2005-10-03       Impact factor: 3.619

2.  Specific detection of Pacific oyster (Crassostrea gigas) larvae in plankton samples using nested polymerase chain reaction.

Authors:  Jawahar G Patil; Rasanthi M Gunasekera; Bruce E Deagle; Nicholas J Bax
Journal:  Mar Biotechnol (NY)       Date:  2005-03-15       Impact factor: 3.619

3.  Molecular detection of Xenostrobus securis and Mytillus galloprovincialis larvae in Galician Coast (Spain).

Authors:  Francisco J Santaclara; Montserrat Espiñeira; Juan M Vieites
Journal:  Mar Biotechnol (NY)       Date:  2007-10-23       Impact factor: 3.619

  3 in total

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