Literature DB >> 10798550

Strain, clone and species: comments on three basic concepts of bacteriology.

L Dijkshoorn, B M Ursing1, J B Ursing1.   

Abstract

Different aspects of the terms strain, clone and species are discussed. The term strain is commonly used to denote a pure culture - here called 'the strain in the taxonomic sense' - but does also refer to a natural concept closely related to the clone. The term clone on the other hand is used both in a general and in a more restricted sense, the latter indicating a low degree of genetic exchange. The important distinction between the definition of a species and the criteria for a species is emphasised and the main kinds of criteria are considered.

Mesh:

Year:  2000        PMID: 10798550     DOI: 10.1099/0022-1317-49-5-397

Source DB:  PubMed          Journal:  J Med Microbiol        ISSN: 0022-2615            Impact factor:   2.472


  24 in total

1.  Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil.

Authors:  J Vogel; P Normand; J Thioulouse; X Nesme; G L Grundmann
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

2.  Does M. tuberculosis genomic diversity explain disease diversity?

Authors:  Mireilla Coscolla; Sebastien Gagneux
Journal:  Drug Discov Today Dis Mech       Date:  2010

3.  Atypical Helicobacter canadensis strains associated with swine.

Authors:  G Douglas Inglis; Malcolm McConville; Anno de Jong
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

4.  Intra-strain variability of methicillin-resistant Staphylococcus aureus strains ST228-MRSA-I and ST5-MRSA-II.

Authors:  S Monecke; R Ehricht; P Slickers; N Wiese; D Jonas
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2009-08-20       Impact factor: 3.267

5.  Delineation of Campylobacter concisus genomospecies by amplified fragment length polymorphism analysis and correlation of results with clinical data.

Authors:  Rune Aabenhus; Stephen L W On; Berit L Siemer; Henrik Permin; Leif P Andersen
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

Review 6.  Diversity within species: interpreting strains in microbiomes.

Authors:  Thea Van Rossum; Pamela Ferretti; Oleksandr M Maistrenko; Peer Bork
Journal:  Nat Rev Microbiol       Date:  2020-06-04       Impact factor: 60.633

Review 7.  Understanding immune-microbiota interactions in the intestine.

Authors:  Philip P Ahern; Kevin J Maloy
Journal:  Immunology       Date:  2019-11-27       Impact factor: 7.397

Review 8.  The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrug-resistant Enterobacteriaceae.

Authors:  Amy J Mathers; Gisele Peirano; Johann D D Pitout
Journal:  Clin Microbiol Rev       Date:  2015-07       Impact factor: 26.132

9.  Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.

Authors:  Alexa B R McIntyre; Rachid Ounit; Ebrahim Afshinnekoo; Robert J Prill; Elizabeth Hénaff; Noah Alexander; Samuel S Minot; David Danko; Jonathan Foox; Sofia Ahsanuddin; Scott Tighe; Nur A Hasan; Poorani Subramanian; Kelly Moffat; Shawn Levy; Stefano Lonardi; Nick Greenfield; Rita R Colwell; Gail L Rosen; Christopher E Mason
Journal:  Genome Biol       Date:  2017-09-21       Impact factor: 13.583

10.  Evolution and diversity in human herpes simplex virus genomes.

Authors:  Moriah L Szpara; Derek Gatherer; Alejandro Ochoa; Benjamin Greenbaum; Aidan Dolan; Rory J Bowden; Lynn W Enquist; Matthieu Legendre; Andrew J Davison
Journal:  J Virol       Date:  2013-11-13       Impact factor: 5.103

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