Literature DB >> 10788395

Monitoring precursor 16S rRNAs of Acinetobacter spp. in activated sludge wastewater treatment systems.

D B Oerther1, J Pernthaler, A Schramm, R Amann, L Raskin.   

Abstract

Recently, Cangelosi and Brabant used oligonucleotide probes targeting the precursor 16S rRNA of Escherichia coli to demonstrate that the levels of precursor rRNA were more sensitive to changes in growth phase than the levels of total rRNA (G. A. Cangelosi and W. H. Brabant, J. Bacteriol. 179:4457-4463, 1997). In order to measure changes in the levels of precursor rRNA in activated sludge systems, we designed oligonucleotide probes targeting the 3' region of the precursor 16S rRNA of Acinetobacter spp. We used these probes to monitor changes in the level of precursor 16S rRNA during batch growth of Acinetobacter spp. in Luria-Bertani (LB) medium, filtered wastewater, and in lab- and full-scale wastewater treatment systems. Consistent with the previous reports for E. coli, results obtained with membrane hybridizations and fluorescence in situ hybridizations with Acinetobacter calcoaceticus grown in LB medium showed a more substantial and faster increase in precursor 16S rRNA levels compared to the increase in total 16S rRNA levels during exponential growth. Diluting an overnight culture of A. calcoaceticus grown in LB medium with filtered wastewater resulted in a pattern of precursor 16S rRNA levels that appeared to follow diauxic growth. In addition, fluorescence in situ hybridizations with oligonucleotide probes targeting total 16S rRNA and precursor 16S rRNA showed that individual cells of A. calcoaceticus expressed highly variable levels of precursor 16S rRNA when adapting from LB medium to filtered sewage. Precursor 16S rRNA levels of Acinetobacter spp. transiently increased when activated sludge was mixed with influent wastewater in lab- and full-scale wastewater treatment systems. These results suggest that Acinetobacter spp. experience a change in growth activity within wastewater treatment systems.

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Year:  2000        PMID: 10788395      PMCID: PMC101468          DOI: 10.1128/AEM.66.5.2154-2165.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  25 in total

1.  Depletion of pre-16S rRNA in starved Escherichia coli cells.

Authors:  G A Cangelosi; W H Brabant
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

2.  Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms.

Authors:  L K Poulsen; G Ballard; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

3.  The oligonucleotide probe database.

Authors:  E W Alm; D B Oerther; N Larsen; D A Stahl; L Raskin
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

4.  Inhibition of Escherichia coli precursor-16S rRNA processing by mouse intestinal contents.

Authors:  T R Licht; T Tolker-Nielsen; K Holmstrøm; K A Krogfelt; S Molin
Journal:  Environ Microbiol       Date:  1999-02       Impact factor: 5.491

5.  Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells.

Authors:  E F DeLong; G S Wickham; N R Pace
Journal:  Science       Date:  1989-03-10       Impact factor: 47.728

6.  Activity and three-dimensional distribution of toluene-degrading Pseudomonas putida in a multispecies biofilm assessed by quantitative in situ hybridization and scanning confocal laser microscopy.

Authors:  S Møller; A R Pedersen; L K Poulsen; E Arvin; S Molin
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

7.  Photosynthate partitioning and fermentation in hot spring microbial mat communities.

Authors:  S C Nold; D M Ward
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

8.  Activity of Toluene-degrading Pseudomonas putida in the early growth phase of a biofilm for waste gas treatment.

Authors:  A R Pedersen; S Møller; S Molin; E Arvin
Journal:  Biotechnol Bioeng       Date:  1997-04-20       Impact factor: 4.530

9.  Application of a strain-specific rRNA oligonucleotide probe targeting Pseudomonas fluorescens Ag1 in a mesocosm study of bacterial release into the environment.

Authors:  M Boye; T Ahl; S Molin
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

10.  Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology.

Authors:  D A Stahl; B Flesher; H R Mansfield; L Montgomery
Journal:  Appl Environ Microbiol       Date:  1988-05       Impact factor: 4.792

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  16 in total

1.  Growth patterns of two marine isolates: adaptations to substrate patchiness?

Authors:  A Pernthaler; J Pernthaler; H Eilers; R Amann
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

2.  Simultaneous fluorescent gram staining and activity assessment of activated sludge bacteria.

Authors:  Scott Forster; Jason R Snape; Hilary M Lappin-Scott; Jonathan Porter
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

3.  Multiple self-splicing introns in the 16S rRNA genes of giant sulfur bacteria.

Authors:  Verena Salman; Rudolf Amann; David A Shub; Heide N Schulz-Vogt
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

4.  Determination of specific growth rate by measurement of specific rate of ribosome synthesis in growing and nongrowing cultures of Acinetobacter calcoaceticus.

Authors:  Matthew R Cutter; Peter G Stroot
Journal:  Appl Environ Microbiol       Date:  2007-12-14       Impact factor: 4.792

5.  Molecular detection of viable bacterial pathogens in water by ratiometric pre-rRNA analysis.

Authors:  Gerard A Cangelosi; Kris M Weigel; Clarita Lefthand-Begay; John S Meschke
Journal:  Appl Environ Microbiol       Date:  2009-11-30       Impact factor: 4.792

6.  Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea.

Authors:  Annelie Pernthaler; Christina M Preston; Jakob Pernthaler; Edward F DeLong; Rudolf Amann
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

7.  Association of the genus Acinetobacter with the decomposition of a swine carcass and the isolation and characterization of a novel strain of Acinetobacter sp. P4.

Authors:  Gary T Howard; William N Norton; Peter G Stroot; Kathryn L Bailey; Erin J Watson
Journal:  Curr Microbiol       Date:  2011-10-11       Impact factor: 2.188

Review 8.  Dead or alive: molecular assessment of microbial viability.

Authors:  Gerard A Cangelosi; John S Meschke
Journal:  Appl Environ Microbiol       Date:  2014-07-18       Impact factor: 4.792

9.  Molecular Viability Testing of UV-Inactivated Bacteria.

Authors:  Kris M Weigel; Felicia K Nguyen; Moira R Kearney; John S Meschke; Gerard A Cangelosi
Journal:  Appl Environ Microbiol       Date:  2017-05-01       Impact factor: 4.792

10.  Nitrification in freshwater sediments as influenced by insect larvae: quantification by microsensors and fluorescence in situ hybridization.

Authors:  D Altmann; P Stief; R Amann; D de Beer
Journal:  Microb Ecol       Date:  2004-04-22       Impact factor: 4.552

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