Literature DB >> 10788333

Candidate locus for a nuclear modifier gene for maternally inherited deafness.

Y Bykhovskaya1, X Estivill, K Taylor, T Hang, M Hamon, R A Casano, H Yang, J I Rotter, M Shohat, N Fischel-Ghodsian.   

Abstract

Maternally inherited deafness associated with the A1555G mutation in the mitochondrial 12S ribosomal RNA (rRNA) gene appears to require additional environmental or genetic changes for phenotypic expression. Aminoglycosides have been identified as one such environmental factor. In one large Arab-Israeli pedigree with congenital hearing loss in some of the family members with the A1555G mutation and with no exposure to aminoglycosides, biochemical evidence has suggested the role of nuclear modifier gene(s), but a genomewide search has indicated the absence of a single major locus having such an effect. Thus it has been concluded that the penetrance of the mitochondrial mutation appears to depend on additive effects of several nuclear genes. We have now investigated 10 multiplex Spanish and Italian families with 35 members with the A1555G mutation and sensorineural deafness. Parametric analysis of a genomewide screen again failed to identify significant evidence for linkage to a single autosomal locus. However, nonparametric analysis supported the role of the chromosomal region around marker D8S277. The combined maximized allele-sharing LOD score of 3.1 in Arab-Israeli/Spanish/Italian families represents a highly suggestive linkage result. We suggest that this region should be considered a candidate for containing the first human nuclear modifier gene for a mitochondrial DNA disorder. The locus operates in Arab-Israeli, Spanish, and Italian families, resulting in the deafness phenotype on a background of the mitochondrial A1555G mutation. No obvious candidate genes are located in this region.

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Year:  2000        PMID: 10788333      PMCID: PMC1378050          DOI: 10.1086/302914

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  15 in total

1.  Heterogenous point mutations in the mitochondrial tRNA Ser(UCN) precursor coexisting with the A1555G mutation in deaf students from Mongolia.

Authors:  A Pandya; X J Xia; R Erdenetungalag; M Amendola; B Landa; J Radnaabazar; B Dangaasuren; G Van Tuyle; W E Nance
Journal:  Am J Hum Genet       Date:  1999-12       Impact factor: 11.025

2.  Parametric and nonparametric linkage analysis: a unified multipoint approach.

Authors:  L Kruglyak; M J Daly; M P Reeve-Daly; E S Lander
Journal:  Am J Hum Genet       Date:  1996-06       Impact factor: 11.025

3.  Allele-sharing models: LOD scores and accurate linkage tests.

Authors:  A Kong; N J Cox
Journal:  Am J Hum Genet       Date:  1997-11       Impact factor: 11.025

4.  Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results.

Authors:  E Lander; L Kruglyak
Journal:  Nat Genet       Date:  1995-11       Impact factor: 38.330

5.  A form of sensorineural deafness is determined by a mitochondrial and an autosomal locus: evidence from pedigree segregation analysis.

Authors:  X Bu; M Shohat; L Jaber; J I Rotter
Journal:  Genet Epidemiol       Date:  1993       Impact factor: 2.135

6.  Complete multipoint sib-pair analysis of qualitative and quantitative traits.

Authors:  L Kruglyak; E S Lander
Journal:  Am J Hum Genet       Date:  1995-08       Impact factor: 11.025

7.  Mitochondrial ribosomal RNA mutation associated with both antibiotic-induced and non-syndromic deafness.

Authors:  T R Prezant; J V Agapian; M C Bohlman; X Bu; S Oztas; W Q Qiu; K S Arnos; G A Cortopassi; L Jaber; J I Rotter
Journal:  Nat Genet       Date:  1993-07       Impact factor: 38.330

8.  Biochemical evidence for nuclear gene involvement in phenotype of non-syndromic deafness associated with mitochondrial 12S rRNA mutation.

Authors:  M X Guan; N Fischel-Ghodsian; G Attardi
Journal:  Hum Mol Genet       Date:  1996-07       Impact factor: 6.150

9.  A genome-wide search for human non-insulin-dependent (type 2) diabetes genes reveals a major susceptibility locus on chromosome 2.

Authors:  C L Hanis; E Boerwinkle; R Chakraborty; D L Ellsworth; P Concannon; B Stirling; V A Morrison; B Wapelhorst; R S Spielman; K J Gogolin-Ewens; J M Shepard; S R Williams; N Risch; D Hinds; N Iwasaki; M Ogata; Y Omori; C Petzold; H Rietzch; H E Schröder; J Schulze; N J Cox; S Menzel; V V Boriraj; X Chen; L R Lim; T Lindner; L E Mereu; Y Q Wang; K Xiang; K Yamagata; Y Yang; G I Bell
Journal:  Nat Genet       Date:  1996-06       Impact factor: 38.330

10.  The A1555G mutation in the 12S rRNA gene of human mtDNA: recurrent origins and founder events in families affected by sensorineural deafness.

Authors:  A Torroni; F Cruciani; C Rengo; D Sellitto; N López-Bigas; R Rabionet; N Govea; A López De Munain; M Sarduy; L Romero; M Villamar; I del Castillo; F Moreno; X Estivill; R Scozzari
Journal:  Am J Hum Genet       Date:  1999-11       Impact factor: 11.025

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  15 in total

1.  Mutation in TRMU related to transfer RNA modification modulates the phenotypic expression of the deafness-associated mitochondrial 12S ribosomal RNA mutations.

Authors:  Min-Xin Guan; Qingfeng Yan; Xiaoming Li; Yelena Bykhovskaya; Jaime Gallo-Teran; Petr Hajek; Noriko Umeda; Hui Zhao; Gema Garrido; Emebet Mengesha; Tsutomu Suzuki; Ignacio del Castillo; Jennifer Lynne Peters; Ronghua Li; Yaping Qian; Xinjian Wang; Ester Ballana; Mordechai Shohat; Jianxin Lu; Xavier Estivill; Kimitsuna Watanabe; Nathan Fischel-Ghodsian
Journal:  Am J Hum Genet       Date:  2006-06-22       Impact factor: 11.025

2.  Modifier variant of METTL13 suppresses human GAB1-associated profound deafness.

Authors:  Rizwan Yousaf; Zubair M Ahmed; Arnaud Pj Giese; Robert J Morell; Ayala Lagziel; Alain Dabdoub; Edward R Wilcox; Sheikh Riazuddin; Thomas B Friedman; Saima Riazuddin
Journal:  J Clin Invest       Date:  2018-03-12       Impact factor: 14.808

Review 3.  Strain background effects and genetic modifiers of hearing in mice.

Authors:  Kenneth R Johnson; Qing Yin Zheng; Konrad Noben-Trauth
Journal:  Brain Res       Date:  2006-03-31       Impact factor: 3.252

4.  A human mitochondrial GTP binding protein related to tRNA modification may modulate phenotypic expression of the deafness-associated mitochondrial 12S rRNA mutation.

Authors:  Xiaoming Li; Min-Xin Guan
Journal:  Mol Cell Biol       Date:  2002-11       Impact factor: 4.272

Review 5.  Mitochondrial-nuclear epistasis: implications for human aging and longevity.

Authors:  Gregory J Tranah
Journal:  Ageing Res Rev       Date:  2010-06-25       Impact factor: 10.895

6.  Mitochondrial COX2 G7598A mutation may have a modifying role in the phenotypic manifestation of aminoglycoside antibiotic-induced deafness associated with 12S rRNA A1555G mutation in a Han Chinese pedigree.

Authors:  Tianbin Chen; Qicai Liu; Ling Jiang; Can Liu; Qishui Ou
Journal:  Genet Test Mol Biomarkers       Date:  2012-12-20

Review 7.  [Mitochondrial hearing impairment. Background, genetic predisposition and possibilities for diagnosis].

Authors:  K Riemann; M Pfister; N Blin; S Kupka
Journal:  HNO       Date:  2004-06       Impact factor: 1.284

Review 8.  Genetic basis of hearing loss in Spanish, Hispanic and Latino populations.

Authors:  Rahul Mittal; Amit P Patel; Desiree Nguyen; Debbie R Pan; Vasanti M Jhaveri; Jason R Rudman; Arjuna Dharmaraja; Denise Yan; Yong Feng; Prem Chapagain; David J Lee; Susan H Blanton; Xue Zhong Liu
Journal:  Gene       Date:  2018-01-10       Impact factor: 3.688

Review 9.  Unresolved questions regarding human hereditary deafness.

Authors:  A U Rehman; T B Friedman; A J Griffith
Journal:  Oral Dis       Date:  2016-07-11       Impact factor: 3.511

10.  Evidence for gene-smoking interactions for hearing loss and deafness in Japanese American families.

Authors:  Jia Y Wan; Christina Cataby; Andrew Liem; Emily Jeffrey; Trina M Norden-Krichmar; Deborah Goodman; Stephanie A Santorico; Karen L Edwards
Journal:  Hear Res       Date:  2019-12-24       Impact factor: 3.208

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