Literature DB >> 10783290

An iterative fitting procedure for the determination of longitudinal NMR cross-correlation rates.

L Wang1, A V Kurochkin, E R Zuiderweg.   

Abstract

We present a method to measure (15)N-(1)H dipolar/(15)N CSA longitudinal cross-correlation rates in protonated proteins. The method depends on the measurement of four observables: the cumulative proton-proton cross relaxation rates, the (15)N R(1) relaxation rate, the multiexponential decay of 2N(Z)H(N)(Z) spin-order, and multiexponential buildup of 2N(Z)H(N)(Z) spin-order. The (15)N-(1)H dipolar/(15)N CSA longitudinal cross-correlation rate is extracted from these measurements by an iterative fitting procedure to the solution of differential equations describing the coupled relaxation dynamics of the z-magnetization of the (15)N nucleus, the two-spin-order 2N(Z)H(N)(Z), and a two-spin-order term 2N(Z)H(Q)(Z) describing the interaction with remote protons. The method is applied to the microbial ribonuclease binase. The method can also extract longitudinal cross-correlation rates for those amide protons that are involved in rapid solvent exchange. The experiment that serves for extracting proton-proton cross-relaxation rates is a modification of 3D (15)N-resolved NOESY-HSQC. The experiment restores the solvent magnetization to its equilibrium state during data detection for all phase cycling steps and all values of NOE mixing times and is recommended for use in standard applications as well. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10783290     DOI: 10.1006/jmre.2000.2064

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  4 in total

1.  qTROSY--a novel scheme for recovery of the anti-TROSY magnetisation.

Authors:  Tammo Diercks; Vladislav Y Orekhov
Journal:  J Biomol NMR       Date:  2005-06       Impact factor: 2.835

2.  Characterization of the overall and local dynamics of a protein with intermediate rotational anisotropy: Differentiating between conformational exchange and anisotropic diffusion in the B3 domain of protein G.

Authors:  Jennifer B Hall; David Fushman
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

3.  Measurement of 15N csa/dipolar cross-correlation rates by means of Spin State Selective experiments.

Authors:  Sabine Bouguet-Bonnet; Pierre Mutzenhardt; Daniel Canet
Journal:  J Biomol NMR       Date:  2004-10       Impact factor: 2.835

4.  Eta(z)/kappa: a transverse relaxation optimized spectroscopy NMR experiment measuring longitudinal relaxation interference.

Authors:  Daniel S Weaver; Erik R P Zuiderweg
Journal:  J Chem Phys       Date:  2008-04-21       Impact factor: 3.488

  4 in total

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