Literature DB >> 10779952

[Software for analyzing bacterial genomes].

A A Mironov, N P Vinokurova, M S Gel'fand.   

Abstract

Mesh：

Year:  2000        PMID： 10779952

Source DB:  PubMed          Journal:  Mol Biol (Mosk)        ISSN： 0026-8984


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  45 in total

1.  Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families.

Authors:  Olga V Kalinina; Andrey A Mironov; Mikhail S Gelfand; Aleksandra B Rakhmaninova
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

Review 2.  Comparative genomic reconstruction of transcriptional regulatory networks in bacteria.

Authors:  Dmitry A Rodionov
Journal:  Chem Rev       Date:  2007-07-18       Impact factor: 60.622

3.  How gene order is influenced by the biophysics of transcription regulation.

Authors:  Grigory Kolesov; Zeba Wunderlich; Olga N Laikova; Mikhail S Gelfand; Leonid A Mirny
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-20       Impact factor: 11.205

4.  A novel class of modular transporters for vitamins in prokaryotes.

Authors:  Dmitry A Rodionov; Peter Hebbeln; Aymerick Eudes; Josy ter Beek; Irina A Rodionova; Guus B Erkens; Dirk J Slotboom; Mikhail S Gelfand; Andrei L Osterman; Andrew D Hanson; Thomas Eitinger
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

5.  New family of tungstate-responsive transcriptional regulators in sulfate-reducing bacteria.

Authors:  Alexey E Kazakov; Lara Rajeev; Eric G Luning; Grant M Zane; Kavya Siddartha; Dmitry A Rodionov; Inna Dubchak; Adam P Arkin; Judy D Wall; Aindrila Mukhopadhyay; Pavel S Novichkov
Journal:  J Bacteriol       Date:  2013-08-02       Impact factor: 3.490

6.  Redefining Escherichia coli σ(70) promoter elements: -15 motif as a complement of the -10 motif.

Authors:  Marko Djordjevic
Journal:  J Bacteriol       Date:  2011-09-09       Impact factor: 3.490

7.  Comparative Analysis of the IclR-Family of Bacterial Transcription Factors and Their DNA-Binding Motifs: Structure, Positioning, Co-Evolution, Regulon Content.

Authors:  Inna A Suvorova; Mikhail S Gelfand
Journal:  Front Microbiol       Date:  2021-06-10       Impact factor: 5.640

8.  Glycerate 2-kinase of Thermotoga maritima and genomic reconstruction of related metabolic pathways.

Authors:  Chen Yang; Dmitry A Rodionov; Irina A Rodionova; Xiaoqing Li; Andrei L Osterman
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

9.  GntR Family of Bacterial Transcription Factors and Their DNA Binding Motifs: Structure, Positioning and Co-Evolution.

Authors:  Inna A Suvorova; Yuri D Korostelev; Mikhail S Gelfand
Journal:  PLoS One       Date:  2015-07-07       Impact factor: 3.240

10.  The Zur regulon of Corynebacterium glutamicum ATCC 13032.

Authors:  Jasmin Schröder; Nina Jochmann; Dmitry A Rodionov; Andreas Tauch
Journal:  BMC Genomics       Date:  2010-01-07       Impact factor: 3.969
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