Literature DB >> 10779725

A consensus Porphyromonas gingivalis promoter sequence.

C A Jackson1, B Hoffmann, N Slakeski, S Cleal, A J Hendtlass, E C Reynolds.   

Abstract

We have determined the transcription start points (tsp) for recently identified Porphyromonas gingivalis W50 genes, kgp, rgpA, rgpB (formerly designated prtK, prtR, and prtRII respectively), fetB and the mcmAB operon. Alignment of the DNA upstream of these tsp and those from the literature has enabled us to identify consensus sequences that may represent a P. gingivalis promoter. There is a potential -10 hexamer sequence, 5'-TATATT-3' centred on average at -10/11 nt which is repeated at -19/20 nt and an upstream consensus, 5'-CAGAT(A/G)-3' which is centred at -39/40 nt.

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Year:  2000        PMID： 10779725     DOI： 10.1111/j.1574-6968.2000.tb09094.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN： 0378-1097            Impact factor:   2.742


  14 in total

1.  Characterization of a novel outer membrane hemin-binding protein of Porphyromonas gingivalis.

Authors:  S G Dashper; A Hendtlass; N Slakeski; C Jackson; K J Cross; L Brownfield; R Hamilton; I Barr; E C Reynolds
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

2.  Characterization of strong promoters from an environmental Flavobacterium hibernum strain by using a green fluorescent protein-based reporter system.

Authors:  S Chen; M Bagdasarian; M G Kaufman; E D Walker
Journal:  Appl Environ Microbiol       Date:  2006-12-22       Impact factor: 4.792

3.  Signaling system in Porphyromonas gingivalis based on a LuxS protein.

Authors:  W O Chung; Y Park; R J Lamont; R McNab; B Barbieri; D R Demuth
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

4.  Community signalling between Streptococcus gordonii and Porphyromonas gingivalis is controlled by the transcriptional regulator CdhR.

Authors:  Aarti Chawla; Takanori Hirano; Brian W Bainbridge; Donald R Demuth; Hua Xie; Richard J Lamont
Journal:  Mol Microbiol       Date:  2010-10-26       Impact factor: 3.501

5.  Role of the Porphyromonas gingivalis extracytoplasmic function sigma factor, SigH.

Authors:  S S Yanamandra; S S Sarrafee; C Anaya-Bergman; K Jones; J P Lewis
Journal:  Mol Oral Microbiol       Date:  2012-03-28       Impact factor: 3.563

6.  Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis.

Authors:  Mark J McBride; Gary Xie; Eric C Martens; Alla Lapidus; Bernard Henrissat; Ryan G Rhodes; Eugene Goltsman; Wei Wang; Jian Xu; David W Hunnicutt; Andrew M Staroscik; Timothy R Hoover; Yi-Qiang Cheng; Jennifer L Stein
Journal:  Appl Environ Microbiol       Date:  2009-08-28       Impact factor: 4.792

7.  Mutational analysis of the ompA promoter from Flavobacterium johnsoniae.

Authors:  Shicheng Chen; Michael Bagdasarian; Michael G Kaufman; Adam K Bates; Edward D Walker
Journal:  J Bacteriol       Date:  2007-05-04       Impact factor: 3.490

8.  Regulation of hemin binding proteins by a novel transcriptional activator in Porphyromonas gingivalis.

Authors:  Jie Wu; Xinghua Lin; Hua Xie
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

9.  FimR and FimS: biofilm formation and gene expression in Porphyromonas gingivalis.

Authors:  Alvin Lo; Christine Seers; Stuart Dashper; Catherine Butler; Glenn Walker; Katrina Walsh; Deanne Catmull; Brigitte Hoffmann; Steven Cleal; Patricia Lissel; John Boyce; Eric Reynolds
Journal:  J Bacteriol       Date:  2010-01-08       Impact factor: 3.490

10.  RNA landscape of the emerging cancer-associated microbe Fusobacterium nucleatum.

Authors:  Falk Ponath; Caroline Tawk; Yan Zhu; Lars Barquist; Franziska Faber; Jörg Vogel
Journal:  Nat Microbiol       Date:  2021-07-08       Impact factor: 17.745
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