Literature DB >> 10773665

Karyotype and chromosome location of characteristic tandem repeats in the pufferfish Tetraodon nigroviridis.

C Fischer1, C Ozouf-Costaz, H Roest Crollius, C Dasilva, O Jaillon, L Bouneau, C Bonillo, J Weissenbach, A Bernot.   

Abstract

Karyotype analysis of Tetraodon nigroviridis, a pufferfish of the family Tetraodontidae with a small compact genome (385 Mb) which is currently being investigated in our laboratory, indicates that this species has 2n = 42 chromosomes. The small chromosome size (the largest pair measuring less than 3 microm) has complicated accurate chromosome pairing based on morphology alone. DAPI staining, however, provides a banding-like pattern. Because of quantitative variations of some heterochromatin classes, the chromosome formula can not be established precisely, but is estimated to include approximately 20 meta- or submetacentric chromosomes and 22 subtelocentric chromosomes. A centromeric satellite, telomeric repeats, and the major and minor rRNA clusters have been localized unequivocally by FISH. As a result, the 28S and 5S rDNA sequences can be used as chromosome-specific probes. Copyright 2000 S. Karger AG, Basel

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Year:  2000        PMID: 10773665     DOI: 10.1159/000015484

Source DB:  PubMed          Journal:  Cytogenet Cell Genet        ISSN: 0301-0171


  14 in total

1.  Two 5S rDNA arrays in neotropical fish species: is it a general rule for fishes?

Authors:  C Martins; P M Galetti
Journal:  Genetica       Date:  2001       Impact factor: 1.082

2.  Genome size evolution in pufferfish: a comparative analysis of diodontid and tetraodontid pufferfish genomes.

Authors:  Daniel E Neafsey; Stephen R Palumbi
Journal:  Genome Res       Date:  2003-05       Impact factor: 9.043

3.  Viability of X-autosome translocations in mammals: an epigenomic hypothesis from a rodent case-study.

Authors:  G Dobigny; C Ozouf-Costaz; C Bonillo; V Volobouev
Journal:  Chromosoma       Date:  2004-07-09       Impact factor: 4.316

4.  A new cytotype of the African pygmy mouse Mus minutoides in Eastern Africa. Implications for the evolution of sex-autosome translocations.

Authors:  F Veyrunes; J Perez; B Borremans; S Gryseels; L R Richards; A Duran; P Chevret; T J Robinson; J Britton-Davidian
Journal:  Chromosome Res       Date:  2014-08-27       Impact factor: 5.239

5.  Cytogenetic and molecular analysis of the pufferfish Tetraodon fluviatilis (Osteichthyes).

Authors:  M Mandrioli; G C Manicardi
Journal:  Genetica       Date:  2001       Impact factor: 1.082

6.  Characterization and repeat analysis of the compact genome of the freshwater pufferfish Tetraodon nigroviridis.

Authors:  H Roest Crollius; O Jaillon; C Dasilva; C Ozouf-Costaz; C Fizames; C Fischer; L Bouneau; A Billault; F Quetier; W Saurin; A Bernot; J Weissenbach
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

7.  Subfunctionalization of duplicate mitf genes associated with differential degeneration of alternative exons in fish.

Authors:  Joachim Altschmied; Jacqueline Delfgaauw; Brigitta Wilde; Jutta Duschl; Laurence Bouneau; Jean-Nicolas Volff; Manfred Schartl
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

8.  Identification of novel retroid agents in Danio rerio, Oryzias latipes, Gasterosteus aculeatus and Tetraodon nigroviridis.

Authors:  Holly A Basta; Alex J Buzak; Marcella A McClure
Journal:  Evol Bioinform Online       Date:  2007-09-06       Impact factor: 1.625

9.  FISH and DAPI staining of the synaptonemal complex of the Nile tilapia (Oreochromis niloticus) allow orientation of the unpaired region of bivalent 1 observed during early pachytene.

Authors:  Konrad Ocalewicz; Jose C Mota-Velasco; Rafael Campos-Ramos; David J Penman
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

10.  Remarkable compartmentalization of transposable elements and pseudogenes in the heterochromatin of the Tetraodon nigroviridis genome.

Authors:  Corinne Dasilva; Hajer Hadji; Catherine Ozouf-Costaz; Sophie Nicaud; Olivier Jaillon; Jean Weissenbach; Hugues Roest Crollius
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-04       Impact factor: 11.205

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