Literature DB >> 10767545

Gene conversion among chemokine receptors.

D C Shields1.   

Abstract

It has been proposed that proteins which are involved in host defence and susceptibility undergo accelerated evolution. Chemokine receptors have roles as pro-inflammatory agents acting in response to infection, and in addition are receptors for entry of viruses and other pathogens into cells. Consistent with this, their rate of evolution is higher than that for other members of the seven-transmembrane domain receptor family. The pattern of evolution of the chemokine receptors was examined in detail. Both chromosomal clusters of chemokine receptors (CC and CXC) showed evidence of a number of gene conversions. These are likely to have resulted in protein sequence changes, which could possibly alter function. 45% of a control group of clustered genes also showed evidence of conversion. Thus, the fixation of a gene conversion is not in itself sufficiently unusual in tandemly repeated genes and cannot be taken as strong evidence of a selection for a novel function. However, the degree of amino acid difference between the chemokine receptors CCR1 and CCR3 was greater than that for any of the control genes. Such changes could have functional implications for inter-species differences in chemokine receptor interactions with pathogens.

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Year:  2000        PMID: 10767545     DOI: 10.1016/s0378-1119(00)00072-x

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  14 in total

1.  Allosteric and orthosteric sites in CC chemokine receptor (CCR5), a chimeric receptor approach.

Authors:  Stefanie Thiele; Anne Steen; Pia C Jensen; Jacek Mokrosinski; Thomas M Frimurer; Mette M Rosenkilde
Journal:  J Biol Chem       Date:  2011-08-30       Impact factor: 5.157

2.  Adaptive Gene Loss? Tracing Back the Pseudogenization of the Rabbit CCL8 Chemokine.

Authors:  Wessel van der Loo; Maria João Magalhaes; Ana Lemos de Matos; Joana Abrantes; Fumio Yamada; Pedro J Esteves
Journal:  J Mol Evol       Date:  2016-06-15       Impact factor: 2.395

3.  Genetic variation at chemokine receptor CCR5 in leporids: alteration at the 2nd extracellular domain by gene conversion with CCR2 in Oryctolagus, but not in Sylvilagus and Lepus species.

Authors:  C R Carmo; P J Esteves; N Ferrand; W van der Loo
Journal:  Immunogenetics       Date:  2006-04-05       Impact factor: 2.846

4.  Evidence of positive selection at codon sites localized in extracellular domains of mammalian CC motif chemokine receptor proteins.

Authors:  Kelsey J Metzger; Michael A Thomas
Journal:  BMC Evol Biol       Date:  2010-05-10       Impact factor: 3.260

5.  Chemokine receptor CXCR3 in turbot (Scophthalmus maximus): cloning, characterization and its responses to lipopolysaccharide.

Authors:  Yadong Chen; Shuhong Zhou; Zhiqiang Jiang; Xiuli Wang; Yang Liu
Journal:  Fish Physiol Biochem       Date:  2015-11-19       Impact factor: 2.794

Review 6.  Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history.

Authors:  Hisayuki Nomiyama; Naoki Osada; Osamu Yoshie
Journal:  Genes Cells       Date:  2012-11-12       Impact factor: 1.891

7.  Phylogenetics in the bioinformatics culture of understanding.

Authors:  Robin G Allaby; Mathew Woodwark
Journal:  Comp Funct Genomics       Date:  2004

8.  Genome diversification mechanism of rodent and Lagomorpha chemokine genes.

Authors:  Kanako Shibata; Hisayuki Nomiyama; Osamu Yoshie; Sumio Tanase
Journal:  Biomed Res Int       Date:  2013-08-07       Impact factor: 3.411

9.  Phylogenomic analysis reveals extensive phylogenetic mosaicism in the human GPCR superfamily.

Authors:  Robin G Allaby; Mathew Woodwark
Journal:  Evol Bioinform Online       Date:  2007-09-26       Impact factor: 1.625

10.  Modeling HIV quasispecies evolutionary dynamics.

Authors:  Luca Sguanci; Franco Bagnoli; Pietro Liò
Journal:  BMC Evol Biol       Date:  2007-08-16       Impact factor: 3.260

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