Literature DB >> 10760252

A topological invariant to predict the three-dimensional writhe of ideal configurations of knots and links.

C Cerf1, A Stasiak.   

Abstract

We present herein a topological invariant of oriented alternating knots and links that predicts the three-dimensional (3D) writhe of the ideal geometrical configuration of the considered knot/link. The fact that we can correlate a geometrical property of a given configuration with a topological invariant supports the notion that the ideal configuration contains important information about knots and links. The importance of the concept of ideal configuration was already suggested by the good correlation between the 3D writhe of ideal knot configurations and the ensemble average of the 3D writhe of random configurations of the considered knots. The values of the new invariant are quantized: multiples of 4/7 for links with an odd number of components (including knots) and 2/7 plus multiples of 4/7 for links with an even number of components.

Year:  2000        PMID: 10760252      PMCID: PMC18095          DOI: 10.1073/pnas.97.8.3795

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  2 in total

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2.  The writhing number of a space curve.

Authors:  F B Fuller
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

  2 in total
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Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-15       Impact factor: 11.205

2.  Scaling behavior of random knots.

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-29       Impact factor: 11.205

3.  Simulations of knotting in confined circular DNA.

Authors:  C Micheletti; D Marenduzzo; E Orlandini; D W Sumners
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4.  DNA-DNA interactions in bacteriophage capsids are responsible for the observed DNA knotting.

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

5.  On the mean and variance of the writhe of random polygons.

Authors:  J Portillo; Y Diao; R Scharein; J Arsuaga; M Vazquez
Journal:  J Phys A Math Theor       Date:  2011       Impact factor: 2.132

6.  Local selection rules that can determine specific pathways of DNA unknotting by type II DNA topoisomerases.

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Journal:  Nucleic Acids Res       Date:  2007-08-01       Impact factor: 16.971

7.  DNA supercoiling inhibits DNA knotting.

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Journal:  Nucleic Acids Res       Date:  2008-07-25       Impact factor: 16.971

  7 in total

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