Literature DB >> 10749978

Allele diversity and germline mutation at the insulin minisatellite.

J D Stead1, A J Jeffreys.   

Abstract

Previous analysis of germline mutation at highly unstable GC-rich minisatellites with continuous allele size distributions revealed similar meiotic recombinational mechanisms operating at all loci investigated. The insulin minisatellite has been studied intensively due to its associations with diabetes, polycystic ovary syndrome, obesity and birth size. Its bimodal allele size distribution in Caucasians suggests a much lower mutation rate and possible differences in the mutation process compared with highly unstable minisatellites. Mutation at the insulin minisatellite therefore was studied both indirectly from allele diversity surveys and directly by recovering de novo mutants from sperm DNA. Structural analysis of variant repeat distributions in 876 alleles identified 189 different alleles, almost all of which could be assigned to one of three very distinct lineages. Variation within a lineage was minor and due mainly to the gain or loss of one or a few repeat units. These events most probably arise by mitotic replication slippage at a frequency of perhaps 10(-3)per gamete. Sperm DNA analysis revealed a second class of mutation occurring at a frequency of approximately 2 x 10(-5)that involved highly complex intra- and inter-allelic rearrangements very similar to those seen at unstable minisatellites. These complex rearrangements were not seen in somatic DNA and are probably meiotic in origin. Minisatellite homozygosity did not reduce the frequency of these mutants in sperm. The insulin minisatellite therefore appears to evolve by two distinct processes: one involving slippage-like events and the second resulting in complex recombinational turnover of allele structure.

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Year:  2000        PMID: 10749978     DOI: 10.1093/hmg/9.5.713

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  10 in total

1.  Structural analysis of insulin minisatellite alleles reveals unusually large differences in diversity between Africans and non-Africans.

Authors:  John D H Stead; Alec J Jeffreys
Journal:  Am J Hum Genet       Date:  2002-10-28       Impact factor: 11.025

2.  Global haplotype diversity in the human insulin gene region.

Authors:  John D H Stead; Matthew E Hurles; Alec J Jeffreys
Journal:  Genome Res       Date:  2003-09       Impact factor: 9.043

3.  Genes mediating environment interactions in type 1 diabetes.

Authors:  Erik Biros; Margaret A Jordan; Alan G Baxter
Journal:  Rev Diabet Stud       Date:  2006-02-10

Review 4.  Role of the 5-HTTLPR and SNP Promoter Polymorphisms on Serotonin Transporter Gene Expression: a Closer Look at Genetic Architecture and In Vitro Functional Studies of Common and Uncommon Allelic Variants.

Authors:  Sandra Iurescia; Davide Seripa; Monica Rinaldi
Journal:  Mol Neurobiol       Date:  2015-10-13       Impact factor: 5.590

5.  Elevated minisatellite mutation rate in the post-chernobyl families from ukraine.

Authors:  Yuri E Dubrova; Gemma Grant; Anatoliy A Chumak; Vasyl A Stezhka; Angela N Karakasian
Journal:  Am J Hum Genet       Date:  2002-09-11       Impact factor: 11.025

6.  WAMI: a web server for the analysis of minisatellite maps.

Authors:  Mohamed Abouelhoda; Mohamed El-Kalioby; Robert Giegerich
Journal:  BMC Evol Biol       Date:  2010-06-06       Impact factor: 3.260

7.  Polymorphism of the insulin gene is associated with increased prostate cancer risk.

Authors:  G Y F Ho; A Melman; S-M Liu; M Li; H Yu; A Negassa; R D Burk; A W Hsing; R Ghavamian; S C Chua
Journal:  Br J Cancer       Date:  2003-01-27       Impact factor: 7.640

8.  The Genetic Profile from HLA and Non-HLA Loci Allows Identification of Atypical Type 2 Diabetes Patients.

Authors:  Matias Fabregat; Mariana Fernandez; Gerardo Javiel; Graciela Vitarella; Adriana Mimbacas
Journal:  J Diabetes Res       Date:  2015-07-27       Impact factor: 4.011

9.  A fast and specific alignment method for minisatellite maps.

Authors:  Sèverine Bérard; François Nicolas; Jérôme Buard; Olivier Gascuel; Eric Rivals
Journal:  Evol Bioinform Online       Date:  2007-02-22       Impact factor: 1.625

10.  New germline mutations in the hypervariable minisatellite CEB1 in the parents of children with leukaemia.

Authors:  B G Davies; A Hussain; S M Ring; J M Birch; T O B Eden; M Reeves; Y E Dubrova; G M Taylor
Journal:  Br J Cancer       Date:  2007-03-27       Impact factor: 7.640

  10 in total

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