| Literature DB >> 10747090 |
N B Elkind1, C Walch-Solimena, P J Novick.
Abstract
Sec2p is required for the polarized transport of secretory vesicles in S. cerevisiae. The Sec2p NH(2) terminus encodes an exchange factor for the Rab protein Sec4p. Sec2p associates with vesicles and in Sec2p COOH-terminal mutants Sec4p and vesicles no longer accumulate at bud tips. Thus, the Sec2p COOH terminus functions in targeting vesicles, however, the mechanism of function is unknown. We found comparable exchange activity for truncated and full-length Sec2 proteins, implying that the COOH terminus does not alter the exchange rate. Full-length Sec2-GFP, similar to Sec4p, concentrates at bud tips. A COOH-terminal 58-amino acid domain is necessary but not sufficient for localization. Sec2p localization depends on actin, Myo2p and Sec1p, Sec6p, and Sec9p function. Full-length, but not COOH-terminally truncated Sec2 proteins are enriched on membranes. Membrane association of full-length Sec2p is reduced in sec6-4 and sec9-4 backgrounds at 37 degrees C but unaffected at 25 degrees C. Taken together, these data correlate loss of localization of Sec2 proteins with reduced membrane association. In addition, Sec2p membrane attachment is substantially Sec4p independent, supporting the notion that Sec2p interacts with membranes via an unidentified Sec2p receptor, which would increase the accessibility of Sec2p exchange activity for Sec4p.Entities:
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Year: 2000 PMID: 10747090 PMCID: PMC2175086 DOI: 10.1083/jcb.149.1.95
Source DB: PubMed Journal: J Cell Biol ISSN: 0021-9525 Impact factor: 10.539
Strain List
| Strain | Genotype |
|---|---|
| NY451 |
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| NY1529 |
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| NY1523 |
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| NY2145 |
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| NY2146 |
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| NY2147 |
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| NY2148 |
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| NY2149 |
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| NY2150 |
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| NY2151 |
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| NY2152 |
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| NY2153 |
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| NY2154 |
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| NY2155 |
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| NY2156 |
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| NY2157 |
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| NY2158 |
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| NY2159 |
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| NY2160 |
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| NY2161 |
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| NY2162 |
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| NY2163 |
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| NY2164 |
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| NY2165 |
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| NY2166 |
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| NY2167 |
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| NY2168 |
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| NY2169 |
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| NY2170 |
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| NY2171 |
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| NY2172 |
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| NY2173 |
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| NY2174 |
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| NY2175 |
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| NY2176 |
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| NY2177 |
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| NY2194 |
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| NY2195 |
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| NY2196 |
|
Figure 1Full-length Sec2-GFP and truncated Sec2-59(1-374)-GFP exchange GDP for GTP on Sec4p with similar rates. Exchange reactions were performed to quantitate the Sec4p GTPγS on-rate. Anti-GFP immune complexes were generated from yeast expressing Sec2-GFP (NY2146), Sec2-59(1-374)-GFP (NY2147), or Sec2p (NY2145, control) and incubated with recombinant, partially purified, Sec4p and GTP/[35S]GTPγS for various time points at 14°C. Reactions were stopped with ice cold exchange buffer and protein-associated radioactivity was quantitated on filters by scintillation counting. Exchange data were normalized to protein present in the immune complexes by subjecting immunoprecipitated material to Western analysis using the anti-GFP antibody. First order rate equations were used to calculate the enzymatic exchange rates. Sec2-GFP exchange rate was set at 100% (black circles). Sec2-59(1-374)-GFP (open circles) was found to exchange with 80% the activity of full-length Sec2-GFP (SEM = 6.9). Untagged Sec2p immune complexes were generated as a control (open squares). This reflects the intrinsic rate of exchange of Sec4p and was similar to protein A–Sepharose beads alone. Truncation of the COOH terminus of Sec2p does not dramatically affect its exchange activity and most likely does not account for the defect observed for Sec2-59(1-374)p expressing yeast.
Figure 3A COOH-terminal domain of Sec2p is necessary but not sufficient for proper polarized localization. Yeast were grown from stationary cultures overnight at 24°C to early-log phase. All strains were grown in YPD except GAL-sec2(1-160)-GFP and GAL-sec2 (161-759)-GFP which were grown in galactose. For GFP visualization, cells were fixed, permeabilized, washed in PBS and directly observed (SEC2, NY2145; SEC2-GFP, NY2146; sec2(1-587)-GFP, NY2149; sec2(1-541)-GFP, NY2150; sec2-70(1-508)-GFP, NY2148; sec2(1-450)-GFP NY2151; and sec2-59(1-374)-GFP, NY2147; sec2-78-GFP, NY2153; GAL-SEC2-GFP, NY2155; GAL-sec2(161-759)-GFP, NY2156). Sec4p was detected by indirect immunofluorescence using anti-Sec4p hybridoma supernatant. Cells were fixed, permeabilized and incubated with anti-Sec4p Ab followed by Cy3-goat anti–mouse (α-Sec4p/sec2(1-450)-GFP and α-Sec4p/SEC2-GFP).
Figure 4The localization of Sec2-GFP is dependent on the actin cytoskeleton, Myo2p, and Smy1p. Haploid yeast were engineered to express Sec2-GFP in wild-type (panels SEC2-GFP, LAT-A, and DMSO) or mutant backgrounds (myo2-66, NY2162; myo2-2, NY2163; smy1-1Δ, NY2161). Cells were grown as in Fig. 3. Temperature shifts were carried out for 1 h at 37°C. Treatment with the drug LAT-A was at a concentration of 200 μm. DMSO was the solvent used to solubilize LAT-A. All cells were fixed and permeabilized before direct visualization of GFP.
Figure 5Polarized localization of Sec2-GFP requires the production of post-Golgi vesicles and functional Sec1p, Sec6p, and Sec9p but not Sec3p, Sec5p, Sec8p, Sec10p, or Sec15p. Cells were engineered expressing Sec2-GFP in various mutant backgrounds. Haploid yeast were grown to mid-log phase and half the culture was shifted to 37°C for various times. The rest of the culture was grown at 24°C and visualized as a control (data not shown). Wild-type, NY2146; sec1-1, NY2164; sec3-2, NY2170; sec4-8, NY2172; sec5-24, NY2167; sec6-4, NY2165; sec8-9, NY2166; sec9-4, NY2171; sec10-2, NY2168; sec12-4, NY2176; sec15-1, NY2169; sec19-1, NY2174. Cycloheximide and azide were used at a concentration of 0.35 and 10 mM, respectively, for 1 h at 25°C. Cells were fixed, permeabilized, and visualized directly. Sec2-GFP is properly localized in all genetic backgrounds with the exception of sec1-1, sec6-4, sec9-4, sec12-4, and sec19-1. Sec2-GFP is also mislocalized in yeast treated with cycloheximide and azide. Sec2-GFP is partially mislocalized in a sec4-8 mutant background.
Figure 7Sec2-GFP is associated with membranes both in a Sec4p-dependent and -independent manner. (A) Membranes (10,000 g pellet, P10) were washed in reaction buffer and incubated at 30°C, 30 min in the presence (+Gdi1p) or absence (−Gdi1p) of partially purified, bacterially expressed, Gdi1p. The reaction was then layered onto a sorbitol cushion and spun at 10,000 g for 20 min at 4°C. Supernatant was removed and the pellet was resuspended to the original reaction volume. Equal volumes of supernatant (S) and pellet (P) were subjected to SDS-PAGE and Western analysis. Sec4p and Sec2-GFP were detected. Sec4p is efficiently solubilized by Gdi1p resulting in a shift of Sec4p from the pellet (P, −Gdi1p) to the supernatant (S, +Gdi1p). Sec2p remains in the pellet in mock- and Gdi1p-treated samples (*). Sec2p breakdown products appear toward the bottom of the Sec2-GFP panel. (B) To ensure that Sec2-GFP is not pelleting independent of membranes upon treatment with Gdi1p, the reactions were repeated and subjected to iodixanol floatation gradients (as in Fig. 6 B). Sec2-GFP indeed migrates in the gradient with membranes. (C) Membranes (100,000 g, P100) were treated as for (A) above, but spun onto a 60% sucrose cushion before the Gdi1p reaction. In addition, the supernatant and pellet were fractionated through a sorbitol cushion (as above) but centrifuged at 500,000 g to ensure that the vesicles pellet through the cushion.
Figure 8Sec2-GFP phosphorylation is dependent on the COOH-terminal domain. Sec2 proteins are phosphorylated. Yeast cells expressing various Sec2 GFP fusion proteins were grown overnight to mid-log phase in phosphate-free glucose or galactose (sec2(1-160)-GFP and sec2(161-759)-GFP) media at 24°C, metabolically labeled with 32P-orthophosphate and harvested. Lysates were generated and post–100,000-g supernatants were immunoprecipitated with either anti-Sec2p (Sec2p) or anti-GFP polyclonal (Sec2p, Sec2-GFP, Sec2(1-541)-GFP, Sec2-70(1-508)-GFP, Sec2(1-450)-GFP, Sec2-59(1-374)-GFP, Sec2(1-160)-GFP, and Sec2(161-759)-GFP) antibodies. Immune complexes were resolved on SDS-PAGE, proteins were transferred to nitrocellulose filters and both exposed to film at −80°C and probed with anti-GFP monoclonal antibodies by Western analysis. Sec2p, Sec2-GFP, Sec2(1-541)-GFP, Sec2-70(1-508)-GFP, and Sec2(161-759)-GFP are phosphorylated while Sec2(1-450)-GFP, Sec2-59(1-374)-GFP, and Sec2(1-160)-GFP are not. The point mutant Sec2-78-GFP is phosphorylated as well (data not shown). Western analysis detects the Sec2-specific proteins present in the lysates (anti-GFP Western). As expected, untagged Sec2p is not detected by the anti-GFP antibodies. Also, only low levels of Sec2p are observed by radiography (32P-labeled) since lower levels of Sec2p are expressed (Fig. 2 B) and the anti-Sec2p polyclonal antibodies are not efficient for immunoprecipitation.