Literature DB >> 10745012

RNA folding: beyond Watson-Crick pairs.

E Westhof1, V Fritsch.   

Abstract

Several crystal structures of RNA fragments, alone or in complex with a specific protein, have been recently solved. In addition, the structures of an artificial ribozyme, the leadzyme, and the cleavage product of a human pathogen ribozyme, have extended the structural diversity of ribozyme architectures. The attained set of folding rules and motifs expand the repertoire seen previously in tRNA structures.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10745012     DOI: 10.1016/s0969-2126(00)00112-x

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  42 in total

Review 1.  Recent advances in the elucidation of the mechanisms of action of ribozymes.

Authors:  Y Takagi; M Warashina; W J Stec; K Yoshinari; K Taira
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT.

Authors:  Yinshan Yang; Nathalie Declerck; Xavier Manival; Stéphane Aymerich; Michel Kochoyan
Journal:  EMBO J       Date:  2002-04-15       Impact factor: 11.598

3.  Prediction of proton chemical shifts in RNA. Their use in structure refinement and validation.

Authors:  J A Cromsigt; C W Hilbers; S S Wijmenga
Journal:  J Biomol NMR       Date:  2001-09       Impact factor: 2.835

4.  Geometric nomenclature and classification of RNA base pairs.

Authors:  N B Leontis; E Westhof
Journal:  RNA       Date:  2001-04       Impact factor: 4.942

Review 5.  Unusual DNA duplex and hairpin motifs.

Authors:  Shan-Ho Chou; Ko-Hsin Chin; Andrew H-J Wang
Journal:  Nucleic Acids Res       Date:  2003-05-15       Impact factor: 16.971

6.  On the role of Hoogsteen:Hoogsteen interactions in RNA: ab initio investigations of structures and energies.

Authors:  Purshotam Sharma; Mohit Chawla; Sitansh Sharma; Abhijit Mitra
Journal:  RNA       Date:  2010-03-30       Impact factor: 4.942

Review 7.  Predicting and modeling RNA architecture.

Authors:  Eric Westhof; Benoît Masquida; Fabrice Jossinet
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-02-01       Impact factor: 10.005

8.  Closing loop base pairs in RNA loop-loop complexes: structural behavior, interaction energy and solvation analysis through molecular dynamics simulations.

Authors:  Jérôme Golebiowski; Serge Antonczak; Juan Fernandez-Carmona; Roger Condom; Daniel Cabrol-Bass
Journal:  J Mol Model       Date:  2004-10-22       Impact factor: 1.810

9.  Topology of three-way junctions in folded RNAs.

Authors:  Aurélie Lescoute; Eric Westhof
Journal:  RNA       Date:  2006-01       Impact factor: 4.942

Review 10.  K-turn motifs in spatial RNA coding.

Authors:  Henri Tiedge
Journal:  RNA Biol       Date:  2006-10-31       Impact factor: 4.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.