Literature DB >> 10735245

Differentiation of Brucella species by random amplified polymorphic DNA analysis.

E Tcherneva1, N Rijpens, B Jersek, L M Herman.   

Abstract

Random amplification of polymorphic DNA (RAPD) was used for discrimination between 46 Brucella strains and 14 representatives of the alpha-2 and alpha-1 subgroups of Proteobacteria. To evaluate a relatively quick and exact method for Brucella identification, the authors specified the most suitable conditions for RAPD amplification of Brucella DNA with two 10-mer primers, containing lower and higher percentages of G and C. The software package PHYLIP 3.1 was used for cluster analysis of the RAPD fingerprints. The optimization of RAPD conditions resulted in PCR mixes suitable for reliable typing of Brucellae. The distance-based methods (Fitch-Margoliash, UPGMA and Neighbour-joining) gave clear discrimination between Brucella species. The constructed dendrograms put Br. canis and Br. suis bv. 1 in the same cluster and differentiated Brucella strains according to their host preferences. RAPD can be useful method to distinguish related bacterial species, and under strictly established conditions the reaction appears to be a simple, quick and sensitive technique for the epidemiological investigation of brucellosis.

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Year:  2000        PMID: 10735245     DOI: 10.1046/j.1365-2672.2000.00945.x

Source DB:  PubMed          Journal:  J Appl Microbiol        ISSN: 1364-5072            Impact factor:   3.772


  10 in total

1.  Molecular characterization of Haemophilus ducreyi isolates from different geographical locations.

Authors:  J Mbwana; I Bölin; E Lyamuya; F Mhalu; T Lagergård
Journal:  J Clin Microbiol       Date:  2006-01       Impact factor: 5.948

2.  Evaluation of a multilocus variable-number tandem-repeat analysis scheme for typing human Brucella isolates in a region of brucellosis endemicity.

Authors:  Mireille M Kattar; Rola F Jaafar; George F Araj; Philippe Le Flèche; Ghassan M Matar; Roland Abi Rached; Simon Khalife; Gilles Vergnaud
Journal:  J Clin Microbiol       Date:  2008-10-15       Impact factor: 5.948

3.  Multilocus variable number tandem repeat analysis (MLVA)-typing of Brucella abortus isolates of India reveals limited genetic diversity.

Authors:  Maninder Singh; Mohd Ashraf Malik; Dhirender Kumar Singh; Soni Doimari; Rohini Sharma
Journal:  Trop Anim Health Prod       Date:  2019-11-11       Impact factor: 1.559

4.  Real-time PCR detection of Brucella abortus: a comparative study of SYBR green I, 5'-exonuclease, and hybridization probe assays.

Authors:  D T Newby; T L Hadfield; F F Roberto
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

5.  High throughput MLVA-16 typing for Brucella based on the microfluidics technology.

Authors:  Riccardo De Santis; Andrea Ciammaruconi; Giovanni Faggioni; Silvia Fillo; Bernardina Gentile; Elisabetta Di Giannatale; Massimo Ancora; Florigio Lista
Journal:  BMC Microbiol       Date:  2011-03-24       Impact factor: 3.605

6.  Differentiation of Brucella abortus and B. melitensis biovars using PCR-RFLP and REP-PCR.

Authors:  M Amoupour; F Nezamzadeh; A Z Bialvaei; M Sedighi; F M Jazi; M Y Alikhani; R Mirnejad
Journal:  New Microbes New Infect       Date:  2019-08-22

7.  Application and evaluation of the MLVA typing assay for the Brucella abortus strains isolated in Korea.

Authors:  Moon Her; Sung-Il Kang; Dong-Hee Cho; Yun-Sang Cho; In-Yeong Hwang; Young-Ran Heo; Suk-Chan Jung; Han-Sang Yoo
Journal:  BMC Microbiol       Date:  2009-10-29       Impact factor: 3.605

8.  Lab on a chip genotyping for Brucella spp. based on 15-loci multi locus VNTR analysis.

Authors:  Riccardo De Santis; Andrea Ciammaruconi; Giovanni Faggioni; Raffaele D'Amelio; Cinzia Marianelli; Florigio Lista
Journal:  BMC Microbiol       Date:  2009-04-07       Impact factor: 3.605

9.  Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs).

Authors:  Betsy J Bricker; Darla R Ewalt; Shirley M Halling
Journal:  BMC Microbiol       Date:  2003-07-11       Impact factor: 3.605

10.  Determination of investigation of the link between human and animal Brucella isolates in Iran using multiple-locus variable number tandem repeat method comprising 16 loci (MLVA-16).

Authors:  Shiva Mirkalantari; Faramarz Masjedian; Amraee Fateme
Journal:  Braz J Infect Dis       Date:  2021-01-03       Impact factor: 3.257

  10 in total

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