Literature DB >> 10734214

Amplifiable DNA from gram-negative and gram-positive bacteria by a low strength pulsed electric field method.

F Vitzthum1, G Geiger, H Bisswanger, B Elkine, H Brunner, J Bernhagen.   

Abstract

An efficient electric field-based procedure for cell disruption and DNA isolation is described. Isoosmotic suspensions of Gram-negative and Gram-positive bacteria were treated with pulsed electric fields of <60 V/cm. Pulses had an exponential decay waveform with a time constant of 3.4 micros. DNA yield was linearly dependent on time or pulse number, with several thousand pulses needed. Electrochemical side-effects and electrophoresis were minimal. The lysates contained non-fragmented DNA which was readily amplifiable by PCR. As the method was not limited to samples of high specific resistance, it should be applicable to physiological fluids and be useful for genomic and DNA diagnostic applications.

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Year:  2000        PMID: 10734214      PMCID: PMC102841          DOI: 10.1093/nar/28.8.e37

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  36 in total

1.  Combined chemical and mechanical processes for the disruption of bacteria.

Authors:  S T Harrison; J S Dennis; H A Chase
Journal:  Bioseparation       Date:  1991

2.  Curing of a plasmid from E.coli using high-voltage electroporation.

Authors:  D M Heery; R Powell; F Gannon; L K Dunican
Journal:  Nucleic Acids Res       Date:  1989-12-11       Impact factor: 16.971

Review 3.  Disruption of micro-organisms.

Authors:  W T Coakley; A J Bater; D Lloyd
Journal:  Adv Microb Physiol       Date:  1977       Impact factor: 3.517

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Authors:  A J Sale; W A Hamilton
Journal:  Biochim Biophys Acta       Date:  1968-08

5.  Cell poration and cell fusion using an oscillating electric field.

Authors:  D C Chang
Journal:  Biophys J       Date:  1989-10       Impact factor: 4.033

6.  Stochastic model for electric field-induced membrane pores. Electroporation.

Authors:  I P Sugar; E Neumann
Journal:  Biophys Chem       Date:  1984-05       Impact factor: 2.352

7.  Lethal effects of high-voltage pulses on E. coli K12.

Authors:  H Hülsheger; E G Niemann
Journal:  Radiat Environ Biophys       Date:  1980       Impact factor: 1.925

8.  Reversible electrical breakdown of lipid bilayer membranes: a charge-pulse relaxation study.

Authors:  R Benz; F Beckers; U Zimmermann
Journal:  J Membr Biol       Date:  1979-07-16       Impact factor: 1.843

9.  Calcium-mediated DNA adsorption to yeast cells and kinetics of cell transformation by electroporation.

Authors:  E Neumann; S Kakorin; I Tsoneva; B Nikolova; T Tomov
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

10.  The dependence of protein release from Bacillus amyloliquefaciens on the growth phase in batch culture.

Authors:  R H Cumming; J Tuffnell; G Street
Journal:  Biotechnol Bioeng       Date:  1985-06       Impact factor: 4.530

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  3 in total

1.  Mechanisms underlying the impact of humic acids on DNA quantification by SYBR Green I and consequences for the analysis of soils and aquatic sediments.

Authors:  Hubert Zipper; Christiane Buta; Katrin Lämmle; Herwig Brunner; Jürgen Bernhagen; Frank Vitzthum
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

2.  Genomic DNA extraction from cells by electroporation on an integrated microfluidic platform.

Authors:  Tao Geng; Ning Bao; Nammalwar Sriranganathanw; Liwu Li; Chang Lu
Journal:  Anal Chem       Date:  2012-10-23       Impact factor: 6.986

Review 3.  Microfluidic electroporation for cellular analysis and delivery.

Authors:  Tao Geng; Chang Lu
Journal:  Lab Chip       Date:  2013-10-07       Impact factor: 6.799

  3 in total

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