Literature DB >> 10733578

Translation of NRF mRNA is mediated by highly efficient internal ribosome entry.

A Oumard1, M Hennecke, H Hauser, M Nourbakhsh.   

Abstract

The ubiquitous transcription factor NRF (NF-kappaB repressing factor) is a constitutive transcriptional silencer of the multifunctional cytokine interferon-beta. NRF mRNA contains a long 5' untranslated region (5'UTR) predicted to fold into a strong secondary structure. The presence of stable hairpins is known to be incompatible with efficient translation by ribosomal scanning. Using dicistronic reporter gene constructs, we show that the NRF 5'UTR acts as an internal ribosome entry site (IRES) which directs ribosomes to the downstream start codon by a cap-independent mechanism. The relative activity of this IRES in various cell lines is at least 30-fold higher than that of picornaviral IRESs. The NRF 5'UTR also functions as a translational enhancer in the context of monocistronic mRNAs. Our results indicate that the NRF 5'UTR contains a highly potent IRES, which may allow for an alternate mode of translation under physiological conditions in which cap-dependent translation is inhibited.

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Year:  2000        PMID: 10733578      PMCID: PMC85491          DOI: 10.1128/MCB.20.8.2755-2759.2000

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  20 in total

Review 1.  Internal ribosome entry sites and dicistronic RNAs in mammalian transgenesis.

Authors:  P S Mountford; A G Smith
Journal:  Trends Genet       Date:  1995-05       Impact factor: 11.639

2.  Insertion mutagenesis to increase secondary structure within the 5' noncoding region of a eukaryotic mRNA reduces translational efficiency.

Authors:  J Pelletier; N Sonenberg
Journal:  Cell       Date:  1985-03       Impact factor: 41.582

3.  Computer prediction of RNA structure.

Authors:  M Zuker
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

4.  Dicistronic targeting constructs: reporters and modifiers of mammalian gene expression.

Authors:  P Mountford; B Zevnik; A Düwel; J Nichols; M Li; C Dani; M Robertson; I Chambers; A Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

5.  Constitutive silencing of IFN-beta promoter is mediated by NRF (NF-kappaB-repressing factor), a nuclear inhibitor of NF-kappaB.

Authors:  M Nourbakhsh; H Hauser
Journal:  EMBO J       Date:  1999-11-15       Impact factor: 11.598

6.  Regulated phosphorylation and low abundance of HeLa cell initiation factor eIF-4F suggest a role in translational control. Heat shock effects on eIF-4F.

Authors:  R Duncan; S C Milburn; J W Hershey
Journal:  J Biol Chem       Date:  1987-01-05       Impact factor: 5.157

7.  Dicistronic transcription units for gene expression in mammalian cells.

Authors:  W Dirks; M Wirth; H Hauser
Journal:  Gene       Date:  1993-06-30       Impact factor: 3.688

8.  Translation initiation of a cardiac voltage-gated potassium channel by internal ribosome entry.

Authors:  D Negulescu; L E Leong; K G Chandy; B L Semler; G A Gutman
Journal:  J Biol Chem       Date:  1998-08-07       Impact factor: 5.157

Review 9.  Properties of human interleukin-2 receptors expressed on non-lymphoid cells by cDNA transfection.

Authors:  H Sabe; S Kondo; A Shimizu; Y Tagaya; J Yodoi; N Kobayashi; M Hatanaka; N Matsunami; M Maeda; T Noma
Journal:  Mol Biol Med       Date:  1984-12

10.  Alternative translation of human fibroblast growth factor 2 mRNA occurs by internal entry of ribosomes.

Authors:  S Vagner; M C Gensac; A Maret; F Bayard; F Amalric; H Prats; A C Prats
Journal:  Mol Cell Biol       Date:  1995-01       Impact factor: 4.272

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  27 in total

1.  Identification of two short internal ribosome entry sites selected from libraries of random oligonucleotides.

Authors:  G C Owens; S A Chappell; V P Mauro; G M Edelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

Review 2.  New ways of initiating translation in eukaryotes?

Authors:  M Kozak
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

3.  New ways of initiating translation in eukaryotes.

Authors:  R Schneider; V I Agol; R Andino; F Bayard; D R Cavener; S A Chappell; J J Chen; J L Darlix; A Dasgupta; O Donzé; R Duncan; O Elroy-Stein; P J Farabaugh; W Filipowicz; M Gale; L Gehrke; E Goldman; Y Groner; J B Harford; M Hatzglou; B He; C U Hellen; M W Hentze; J Hershey; P Hershey; T Hohn; M Holcik; C P Hunter; K Igarashi; R Jackson; R Jagus; L S Jefferson; B Joshi; R Kaempfer; M Katze; R J Kaufman; M Kiledjian; S R Kimball; A Kimchi; K Kirkegaard; A E Koromilas; R M Krug; V Kruys; B J Lamphear; S Lemon; R E Lloyd; L E Maquat; E Martinez-Salas; M B Mathews; V P Mauro; S Miyamoto; I Mohr; D R Morris; E G Moss; N Nakashima; A Palmenberg; N T Parkin; T Pe'ery; J Pelletier; S Peltz; T V Pestova; E V Pilipenko; A C Prats; V Racaniello; G S Read; R E Rhoads; J D Richter; R Rivera-Pomar; T Rouault; A Sachs; P Sarnow; G C Scheper; L Schiff; D R Schoenberg; B L Semler; A Siddiqui; T Skern; N Sonenberg; W Sossin; N Standart; S M Tahara; A A Thomas; J J Toulmé; J Wilusz; E Wimmer; G Witherell; M Wormington
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

4.  La autoantigen enhances translation of BiP mRNA.

Authors:  Y K Kim; S H Back; J Rho; S H Lee; S K Jang
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

5.  Biochemical and functional analysis of a 9-nt RNA sequence that affects translation efficiency in eukaryotic cells.

Authors:  Stephen A Chappell; Gerald M Edelman; Vincent P Mauro
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

6.  Two independent mechanisms promote expression of an N-terminal truncated USP18 isoform with higher DeISGylation activity in the nucleus.

Authors:  Christoph Burkart; Jun-Bao Fan; Dong-Er Zhang
Journal:  J Biol Chem       Date:  2011-12-14       Impact factor: 5.157

Review 7.  Searching for IRES.

Authors:  Stephen D Baird; Marcel Turcotte; Robert G Korneluk; Martin Holcik
Journal:  RNA       Date:  2006-09-06       Impact factor: 4.942

8.  Splicing mediates the activity of four putative cellular internal ribosome entry sites.

Authors:  Brian T Baranick; Nathan A Lemp; Jill Nagashima; Kei Hiraoka; Noriyuki Kasahara; Christopher R Logg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-07       Impact factor: 11.205

9.  Recombinant protein expression by targeting pre-selected chromosomal loci.

Authors:  Kristina Nehlsen; Roland Schucht; Leonor da Gama-Norton; Wolfgang Krömer; Alexandra Baer; Aziz Cayli; Hansjörg Hauser; Dagmar Wirth
Journal:  BMC Biotechnol       Date:  2009-12-14       Impact factor: 2.563

10.  Toxin-antitoxin based transgene expression in mammalian cells.

Authors:  K Nehlsen; S Herrmann; J Zauers; H Hauser; D Wirth
Journal:  Nucleic Acids Res       Date:  2009-12-08       Impact factor: 16.971

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