Literature DB >> 10730591

Ty1-copia-retrotransposon behavior in a polyploid cotton.

R E Hanson1, M N Islam-Faridi, C F Crane, M S Zwick, D G Czeschin, J F Wendel, T D McKnight, H J Price, D M Stelly.   

Abstract

Retrotransposons constitute a ubiquitous and dynamic component of plant genomes. Intragenomic and intergenomic comparisons of related genomes offer potential insights into retrotransposon behavior and genomic effects. Here, we have used fluorescent in-situ hybridization to determine the chromosomal distributions of a Ty1-copia-like retrotransposon in the cotton AD-genome tetraploid Gossypium hirsutum and closely related putative A- and D-genome diploid ancestors. Retrotransposon clone A108 hybridized to all G. hirsutum chromosomes, approximately equal in intensity in the A- and D-subgenomes. Similar results were obtained by hybridization of A108 to the A-genome diploid G. arboreum, whereas no signal was detected on chromosomes of the D-genome diploid G. raimondii. The significance and potential causes of these observations are discussed.

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Year:  2000        PMID： 10730591     DOI： 10.1023/a:1009239522541

Source DB:  PubMed          Journal:  Chromosome Res        ISSN： 0967-3849            Impact factor:   5.239


  17 in total

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Authors:  A J Flavell; D B Smith; A Kumar
Journal:  Mol Gen Genet       Date:  1992-01

2.  A Cytological Method for Genome Analysis in Gossypium.

Authors:  M Y Menzel
Journal:  Genetics       Date:  1955-03       Impact factor: 4.562

3.  Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms.

Authors:  J Masterson
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

Review 4.  The adventures of the Ty1-copia group of retrotransposons in plants.

Authors:  A Kumar
Journal:  Trends Genet       Date:  1996-02       Impact factor: 11.639

5.  The Ty1-copia group retrotransposons of Allium cepa are distributed throughout the chromosomes but are enriched in the terminal heterochromatin.

Authors:  S R Pearce; U Pich; G Harrison; A J Flavell; J S Heslop-Harrison; I Schubert; A Kumar
Journal:  Chromosome Res       Date:  1996-08       Impact factor: 5.239

Review 6.  Rapid evolution of RNA genomes.

Authors:  J Holland; K Spindler; F Horodyski; E Grabau; S Nichol; S VandePol
Journal:  Science       Date:  1982-03-26       Impact factor: 47.728

7.  Chromosomal and genomic organization of Ty1-copia-like retrotransposon sequences in the genus Avena.

Authors:  A Katsiotis; T Schmidt; J S Heslop-Harrison
Journal:  Genome       Date:  1996-04       Impact factor: 2.166

8.  Retrotransposon BARE-1 is a major, dispersed component of the barley (Hordeum vulgare L.) genome.

Authors:  A Suoniemi; K Anamthawat-Jónsson; T Arna; A H Schulman
Journal:  Plant Mol Biol       Date:  1996-03       Impact factor: 4.076

9.  Analysis and chromosomal localization of retrotransposons in sugar beet (Beta vulgaris L.): LINEs and Ty1-copia-like elements as major components of the genome.

Authors:  T Schmidt; S Kubis; J S Heslop-Harrison
Journal:  Chromosome Res       Date:  1995-09       Impact factor: 5.239

10.  The Ty1-copia group retrotransposons in Vicia species: copy number, sequence heterogeneity and chromosomal localisation.

Authors:  S R Pearce; G Harrison; D Li; J Heslop-Harrison; A Kumar; A J Flavell
Journal:  Mol Gen Genet       Date:  1996-02-25
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  9 in total

Review 1.  Genome evolution in polyploids.

Authors:  J F Wendel
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

2.  Is photosynthetic transcriptional regulation in Triticum aestivum L. cv. 'TugelaDN' a contributing factor for tolerance to Diuraphis noxia (Homoptera: Aphididae)?

Authors:  Anna-Maria Botha; Lynelle Lacock; Chantal van Niekerk; M Thuto Matsioloko; Franco B du Preez; Shilo Loots; Eduard Venter; Karl J Kunert; Christopher A Cullis
Journal:  Plant Cell Rep       Date:  2005-11-18       Impact factor: 4.570

Review 3.  Nucleolar dominance and different genome behaviors in hybrids and allopolyploids.

Authors:  Xian-Hong Ge; Li Ding; Zai-Yun Li
Journal:  Plant Cell Rep       Date:  2013-07-18       Impact factor: 4.570

4.  Occurrence and chromosome distribution of retroelements and NUPT sequences in Copaifera langsdorffii Desf. (Caesalpinioideae).

Authors:  Marcos Letaif Gaeta; Priscila Mary Yuyama; Daniele Sartori; Maria Helena Pelegrinelli Fungaro; André Luís Laforga Vanzela
Journal:  Chromosome Res       Date:  2010-04-27       Impact factor: 5.239

5.  Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) group.

Authors:  H Ozkan; A A Levy; M Feldman
Journal:  Plant Cell       Date:  2001-08       Impact factor: 11.277

Review 6.  Polyploidy in fungi: evolution after whole-genome duplication.

Authors:  Warren Albertin; Philippe Marullo
Journal:  Proc Biol Sci       Date:  2012-04-04       Impact factor: 5.349

7.  Review of the Application of Modern Cytogenetic Methods (FISH/GISH) to the Study of Reticulation (Polyploidy/Hybridisation).

Authors:  Michael Chester; Andrew R Leitch; Pamela S Soltis; Douglas E Soltis
Journal:  Genes (Basel)       Date:  2010-07-02       Impact factor: 4.096

8.  Impact of ploidy level on the distribution of Pokey element insertions in the Daphnia pulex complex.

Authors:  Roland Vergilino; Shannon Hc Eagle; Teresa J Crease; France Dufresne
Journal:  Mob DNA       Date:  2014-01-02

9.  A Gossypium BAC clone contains key repeat components distinguishing sub-genome of allotetraploidy cottons.

Authors:  Yuling Liu; Renhai Peng; Fang Liu; Xingxing Wang; Xinglei Cui; Zhongli Zhou; Chunying Wang; Xiaoyan Cai; Yuhong Wang; Zhongxu Lin; Kunbo Wang
Journal:  Mol Cytogenet       Date:  2016-03-22       Impact factor: 2.009
  9 in total

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