Literature DB >> 10723739

Molecular adaptation of alanine:glyoxylate aminotransferase targeting in primates.

J D Holbrook1, G M Birdsey, Z Yang, M W Bruford, C J Danpure.   

Abstract

The intermediary metabolic enzyme alanine:glyoxylate aminotransferase (AGT) is targeted to different organelles (mitochondria and/or peroxisomes) in different species. Possibly under the influence of dietary selection pressure, the subcellular distribution of AGT has changed on at least eight occasions during the evolution of mammals. AGT targeting is dependent on the variable use of two alternative transcription and translation initiation sites which determine whether or not the region encoding the N-terminal mitochondrial targeting sequence is contained within the open reading frame. In the present study, we sequenced the 5' region of the AGT gene, including both ancestral translation start sites, for 11 anthropoid primates and compared the results with data already available for two others. We show that while the more 3' of the two translation start sites is maintained in all species, the more 5' site has been lost in six species (five of seven catarrhines and one of six platyrrhines). In addition, the remaining two catarrhines, which have maintained the 5' translation start site, are predicted to have lost mitochondrial targeting by a different mechanism, possibly loss of the more 5' transcription start site. Analysis of the relative frequencies of nonsynonymous and synonymous mutations in the region encoding the extant or ancestral mitochondrial targeting sequences led us to suggest that there has been recent strong positive selection pressure to lose, or decrease the efficiency of, mitochondrial AGT targeting in several anthropoid lineages, and that the loss of mitochondrial targeting in this group of mammals is likely to have occurred on at least four, and possibly five, separate occasions.

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Year:  2000        PMID: 10723739     DOI: 10.1093/oxfordjournals.molbev.a026318

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  11 in total

1.  Selective pressure on the allantoicase gene during vertebrate evolution.

Authors:  Davide Vigetti; Giorgio Binelli; Claudio Monetti; Mariangela Prati; Giovanni Bernardini; Rosalba Gornati
Journal:  J Mol Evol       Date:  2003-12       Impact factor: 2.395

2.  A comparative analysis of the evolutionary relationship between diet and enzyme targeting in bats, marsupials and other mammals.

Authors:  Graeme M Birdsey; Jackie Lewin; Joanna D Holbrook; Victor R Simpson; Andrew A Cunningham; Christopher J Danpure
Journal:  Proc Biol Sci       Date:  2005-04-22       Impact factor: 5.349

Review 3.  Lifestyle, genetics, and disease in Sami.

Authors:  Alastair B Ross; Asa Johansson; Max Ingman; Ulf Gyllensten
Journal:  Croat Med J       Date:  2006-08       Impact factor: 1.351

4.  Diet and the frequency of the alanine:glyoxylate aminotransferase Pro11Leu polymorphism in different human populations.

Authors:  Elizabeth F Caldwell; Lianne R Mayor; Mark G Thomas; Christopher J Danpure
Journal:  Hum Genet       Date:  2004-10-05       Impact factor: 4.132

5.  Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Pi, NMT and PTS1.

Authors:  Frank Eisenhaber; Birgit Eisenhaber; Werner Kubina; Sebastian Maurer-Stroh; Georg Neuberger; Georg Schneider; Michael Wildpaner
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  Abolition of peroxiredoxin-5 mitochondrial targeting during canid evolution.

Authors:  Valérie Van der Eecken; André Clippe; Sophie Dekoninck; Julie Goemaere; Geoffroy Walbrecq; Paul P Van Veldhoven; Bernard Knoops
Journal:  PLoS One       Date:  2013-09-02       Impact factor: 3.240

7.  Trehalase Gene as a Molecular Signature of Dietary Diversification in Mammals.

Authors:  Hengwu Jiao; Libiao Zhang; Huan-Wang Xie; Nancy B Simmons; Hui Liu; Huabin Zhao
Journal:  Mol Biol Evol       Date:  2019-10-01       Impact factor: 16.240

8.  Predicted mouse peroxisome-targeted proteins and their actual subcellular locations.

Authors:  Yumi Mizuno; Igor V Kurochkin; Marlis Herberth; Yasushi Okazaki; Christian Schönbach
Journal:  BMC Bioinformatics       Date:  2008-12-12       Impact factor: 3.169

9.  Hidden localization motifs: naturally occurring peroxisomal targeting signals in non-peroxisomal proteins.

Authors:  Georg Neuberger; Markus Kunze; Frank Eisenhaber; Johannes Berger; Andreas Hartig; Cecile Brocard
Journal:  Genome Biol       Date:  2004-11-30       Impact factor: 13.583

Review 10.  Evolutionary Divergent Suppressor Mutations in Conformational Diseases.

Authors:  Noel Mesa-Torres; Isabel Betancor-Fernández; Elisa Oppici; Barbara Cellini; Eduardo Salido; Angel L Pey
Journal:  Genes (Basel)       Date:  2018-07-13       Impact factor: 4.096

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