Literature DB >> 10722656

Evidence that ThiI, an enzyme shared between thiamin and 4-thiouridine biosynthesis, may be a sulfurtransferase that proceeds through a persulfide intermediate.

P M Palenchar1, C J Buck, H Cheng, T J Larson, E G Mueller.   

Abstract

ThiI is an enzyme common to the biosynthetic pathways leading to both thiamin and 4-thiouridine in tRNA. Comparison of the ThiI sequence with protein sequences in the data bases revealed that the Escherichia coli enzyme contains a C-terminal extension displaying sequence similarity to the sulfurtransferase rhodanese. Cys-456 of ThiI aligns with the active site cysteine residue of rhodanese that transiently forms a persulfide during catalysis. We investigated the functional importance of this sequence similarity and discovered that, like rhodanese, ThiI catalyzes the transfer of sulfur from thiosulfate to cyanide. Mutation of Cys-456 to alanine impairs this sulfurtransferase activity, and the C456A ThiI is incapable of supporting generation of 4-thiouridine in tRNA both in vitro and in vivo. We therefore conclude that Cys-456 of ThiI is critical for activity and propose that Cys-456 transiently forms a persulfide during catalysis. To accommodate this hypothesis, we propose a general mechanism for sulfur transfer in which the terminal sulfur of the persulfide first acts as a nucleophile and is then transferred as an equivalent of S(2-) rather than S(0).

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Year:  2000        PMID: 10722656     DOI: 10.1074/jbc.275.12.8283

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  52 in total

1.  A method for prediction of the locations of linker regions within large multifunctional proteins, and application to a type I polyketide synthase.

Authors:  Daniel W Udwary; Matthew Merski; Craig A Townsend
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

Review 2.  The rhodanese/Cdc25 phosphatase superfamily. Sequence-structure-function relations.

Authors:  Domenico Bordo; Peer Bork
Journal:  EMBO Rep       Date:  2002-08       Impact factor: 8.807

3.  Functional Analysis of Bacillus subtilis Genes Involved in the Biosynthesis of 4-Thiouridine in tRNA.

Authors:  Lauren J Rajakovich; John Tomlinson; Patricia C Dos Santos
Journal:  J Bacteriol       Date:  2012-07-06       Impact factor: 3.490

4.  Biosynthesis of the thiazole moiety of thiamin in Escherichia coli: identification of an acyldisulfide-linked protein--protein conjugate that is functionally analogous to the ubiquitin/E1 complex.

Authors:  J Xi; Y Ge; C Kinsland; F W McLafferty; T P Begley
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

Review 5.  An embarrassment of riches: the enzymology of RNA modification.

Authors:  Dirk Iwata-Reuyl
Journal:  Curr Opin Chem Biol       Date:  2008-03-14       Impact factor: 8.822

6.  The danger of annotation by analogy: most "thiI" genes play no role in thiamine biosynthesis.

Authors:  Robert A Bender
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

7.  Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA.

Authors:  Sebastian Leidel; Patrick G A Pedrioli; Tamara Bucher; Renée Brost; Michael Costanzo; Alexander Schmidt; Ruedi Aebersold; Charles Boone; Kay Hofmann; Matthias Peter
Journal:  Nature       Date:  2009-01-14       Impact factor: 49.962

8.  Biosynthesis of 4-thiouridine in tRNA in the methanogenic archaeon Methanococcus maripaludis.

Authors:  Yuchen Liu; Xiang Zhu; Akiyoshi Nakamura; Ron Orlando; Dieter Söll; William B Whitman
Journal:  J Biol Chem       Date:  2012-08-17       Impact factor: 5.157

9.  Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.

Authors:  Rong Shi; Ariane Proteau; Magda Villarroya; Ismaïl Moukadiri; Linhua Zhang; Jean-François Trempe; Allan Matte; M Eugenia Armengod; Miroslaw Cygler
Journal:  PLoS Biol       Date:  2010-04-13       Impact factor: 8.029

10.  Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans.

Authors:  Raquel Quatrini; Corinne Appia-Ayme; Yann Denis; Eugenia Jedlicki; David S Holmes; Violaine Bonnefoy
Journal:  BMC Genomics       Date:  2009-08-24       Impact factor: 3.969

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