Literature DB >> 10716194

Cleaved antitrypsin polymers at atomic resolution.

M A Dunstone1, W Dai, J C Whisstock, J Rossjohn, R N Pike, S C Feil, B F Le Bonniec, M W Parker, S P Bottomley.   

Abstract

Alpha1-antitrypsin deficiency, which can lead to both emphysema and liver disease, is a result of the accumulation of alpha1-antitrypsin polymers within the hepatocyte. A wealth of biochemical and biophysical data suggests that alpha1-antitrypsin polymers form via insertion of residues from the reactive center loop of one molecule into the beta-sheet of another. However, this long-standing hypothesis has not been confirmed by direct structural evidence. Here, we describe the first crystallographic evidence of a beta-strand linked polymer form of alpha1-antitrypsin: the crystal structure of a cleaved alpha1-antitrypsin polymer.

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Year:  2000        PMID: 10716194      PMCID: PMC2144548          DOI: 10.1110/ps.9.2.417

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  22 in total

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2.  Conformation of the reactive site loop of alpha 1-proteinase inhibitor probed by limited proteolysis.

Authors:  A E Mast; J J Enghild; G Salvesen
Journal:  Biochemistry       Date:  1992-03-17       Impact factor: 3.162

3.  The mechanism of Z alpha 1-antitrypsin accumulation in the liver.

Authors:  D A Lomas; D L Evans; J T Finch; R W Carrell
Journal:  Nature       Date:  1992-06-18       Impact factor: 49.962

4.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

5.  Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes.

Authors:  P Matsudaira
Journal:  J Biol Chem       Date:  1987-07-25       Impact factor: 5.157

6.  The role of thrombin's Tyr-Pro-Pro-Trp motif in the interaction with fibrinogen, thrombomodulin, protein C, antithrombin III, and the Kunitz inhibitors.

Authors:  B F Le Bonniec; E R Guinto; R T MacGillivray; S R Stone; C T Esmon
Journal:  J Biol Chem       Date:  1993-09-05       Impact factor: 5.157

7.  Effects of mutations in the hinge region of serpins.

Authors:  P C Hopkins; R W Carrell; S R Stone
Journal:  Biochemistry       Date:  1993-08-03       Impact factor: 3.162

8.  Alpha 1-antitrypsin Siiyama (Ser53-->Phe). Further evidence for intracellular loop-sheet polymerization.

Authors:  D A Lomas; J T Finch; K Seyama; T Nukiwa; R W Carrell
Journal:  J Biol Chem       Date:  1993-07-25       Impact factor: 5.157

9.  Human alpha 1-proteinase inhibitor. Crystal structure analysis of two crystal modifications, molecular model and preliminary analysis of the implications for function.

Authors:  H Loebermann; R Tokuoka; J Deisenhofer; R Huber
Journal:  J Mol Biol       Date:  1984-08-15       Impact factor: 5.469

10.  Immunochemical identification of the serine protease inhibitor alpha 1-antichymotrypsin in the brain amyloid deposits of Alzheimer's disease.

Authors:  C R Abraham; D J Selkoe; H Potter
Journal:  Cell       Date:  1988-02-26       Impact factor: 41.582

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  27 in total

1.  The role of strand 1 of the C beta-sheet in the structure and function of alpha(1)-antitrypsin.

Authors:  S P Bottomley; I D Lawrenson; D Tew; W Dai; J C Whisstock; R N Pike
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

2.  Probing serpin conformational change using mass spectrometry and related methods.

Authors:  Yuko Tsutsui; Anindya Sarkar; Patrick L Wintrode
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

3.  Defining the mechanism of polymerization in the serpinopathies.

Authors:  Ugo I Ekeowa; Joanna Freeke; Elena Miranda; Bibek Gooptu; Matthew F Bush; Juan Pérez; Jeff Teckman; Carol V Robinson; David A Lomas
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-20       Impact factor: 11.205

4.  The structural basis of serpin polymerization studied by hydrogen/deuterium exchange and mass spectrometry.

Authors:  Yuko Tsutsui; Barbara Kuri; Tanusree Sengupta; Patrick L Wintrode
Journal:  J Biol Chem       Date:  2008-09-15       Impact factor: 5.157

Review 5.  S-glutathionylation: from molecular mechanisms to health outcomes.

Authors:  Ying Xiong; Joachim D Uys; Kenneth D Tew; Danyelle M Townsend
Journal:  Antioxid Redox Signal       Date:  2011-05-25       Impact factor: 8.401

Review 6.  Alpha1-antitrypsin deficiency. 4: Molecular pathophysiology.

Authors:  D A Lomas; H Parfrey
Journal:  Thorax       Date:  2004-06       Impact factor: 9.139

7.  Fluorescence correlation spectroscopic study of serpin depolymerization by computationally designed peptides.

Authors:  Pramit Chowdhury; Wei Wang; Stacey Lavender; Michelle R Bunagan; Jason W Klemke; Jia Tang; Jeffrey G Saven; Barry S Cooperman; Feng Gai
Journal:  J Mol Biol       Date:  2007-03-21       Impact factor: 5.469

8.  The human serpin proteinase inhibitor-9 self-associates at physiological temperatures.

Authors:  Lauren N Benning; James C Whisstock; Jiuru Sun; Phillip I Bird; Stephen P Bottomley
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

9.  Plasminogen activator inhibitor-1 polymers, induced by inactivating amphipathic organochemical ligands.

Authors:  Katrine E Pedersen; Anja P Einholm; Anni Christensen; Lotte Schack; Troels Wind; John M Kenney; Peter A Andreasen
Journal:  Biochem J       Date:  2003-06-15       Impact factor: 3.857

10.  Crystallographic and cellular characterisation of two mechanisms stabilising the native fold of alpha1-antitrypsin: implications for disease and drug design.

Authors:  Bibek Gooptu; Elena Miranda; Irene Nobeli; Meera Mallya; Andrew Purkiss; Sarah C Leigh Brown; Charlotte Summers; Russell L Phillips; David A Lomas; Tracey E Barrett
Journal:  J Mol Biol       Date:  2009-02-14       Impact factor: 5.469

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