Literature DB >> 10712616

Pyridoxal 5'-phoshate schiff base in Citrobacter freundii tyrosinephenol-lyase. Ionic and tautomeric equilibria.

N P Bazhulina1, Y V Morozov, A I Papisova, T V Demidkina.   

Abstract

Spectral properties of the internal Schiff base in tyrosine phenol-lyase have been investigated in the presence of an activating cation K+ and a cation-inhibitor Na+. The holoenzyme absorption spectra in the pH range 6.5-8.7 were recorded in the presence of K+. No apparent pKa value of the coenzyme chromophore was found in this pH range, indicating that the internal Schiff base does not change its ionic form on going from pH 6.5 to 8.7. To determine the ionic state and tautomeric composition of the Schiff base in tyrosine phenol-lyase, the absorption and circular dichroism spectra were analyzed using lognormal distribution curves. The predominant form of the internal Schiff base is that with protonated pyridinium and aldimine nitrogen atoms and deprotonated 3'-hydroxy group, i.e. the ketoenamine. This form is in prototropic equilibrium with its enolimine tautomer. The internal aldimine ionic form is changed upon replacement of K+ with Na+. This replacement leads to a significant decrease in the pKa value of pyridinium nitrogen of the pyridoxal-P.

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Year:  2000        PMID: 10712616     DOI: 10.1046/j.1432-1327.2000.01185.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  4 in total

1.  Tyrosine phenol-lyase: the role of the coenzyme-binding residue Ser-254 in catalysis.

Authors:  A I Papisova; N P Bazhulina; N G Faleev; T V Demidkina
Journal:  Dokl Biochem Biophys       Date:  2003 Jul-Aug       Impact factor: 0.788

2.  Structures of apo- and holo-tyrosine phenol-lyase reveal a catalytically critical closed conformation and suggest a mechanism for activation by K+ ions.

Authors:  Dalibor Milić; Dubravka Matković-Calogović; Tatyana V Demidkina; Vitalia V Kulikova; Nina I Sinitzina; Alfred A Antson
Journal:  Biochemistry       Date:  2006-06-20       Impact factor: 3.162

3.  Tyrosine phenol-lyase and tryptophan indole-lyase encapsulated in wet nanoporous silica gels: Selective stabilization of tertiary conformations.

Authors:  Barbara Pioselli; Stefano Bettati; Tatyana V Demidkina; Lyudmila N Zakomirdina; Robert S Phillips; Andrea Mozzarelli
Journal:  Protein Sci       Date:  2004-04       Impact factor: 6.725

4.  Protonation states of the tryptophan synthase internal aldimine active site from solid-state NMR spectroscopy: direct observation of the protonated Schiff base linkage to pyridoxal-5'-phosphate.

Authors:  Bethany G Caulkins; Baback Bastin; Chen Yang; Thomas J Neubauer; Robert P Young; Eduardo Hilario; Yu-ming M Huang; Chia-en A Chang; Li Fan; Michael F Dunn; Michael J Marsella; Leonard J Mueller
Journal:  J Am Chem Soc       Date:  2014-09-03       Impact factor: 15.419

  4 in total

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