Literature DB >> 10706608

On the interpretation of quantitative structure-function activity relationship data for lactate oxidase.

K Yorita1, H Misaki, B A Palfey, V Massey.   

Abstract

The native flavin, FMN, has been removed from the l-lactate oxidase of Aerococcus viridans, and the apoprotein reconstituted with 12 FMN derivatives with various substituents at the flavin 6- and 8-positions. Impressive linear relationships are exhibited between the sum of the Hammett final sigma(para) and final sigma(ortho) parameters and the redox potentials of the free flavins, and between the redox potentials of the free and enzyme-bound flavins. Rapid reaction kinetics studies of the reconstituted enzymes with the substrates l-lactate and l-mandelate show an increase in the reduction rate constant with increasing redox potential, except that, with lactate, a limiting rate constant of approximately 700 s(-1) is obtained with flavins of high potential. Similar breakpoints are found in plots of the rate constants for flavin N5-sulfite adduct formation and for the reaction of the reduced enzymes with molecular oxygen. These results are interpreted in terms of a two-step equilibrium preceding the chemical reaction step, in which the second equilibrium step provides an upper limit to the rate with which the particular substrate or ligand is positioned with the flavin in the correct fashion for the observed chemical reaction to occur. The relationship of rate constants for flavin reduction and N5-sulfite adduct formation with flavin redox potential below the observed breakpoint indicate development of significant negative charge in the transition states of the reactions. In the case of reduction by substrate, the results are consistent either with a hydride transfer mechanism or with the so called "carbanion" mechanism, in which the substrate alpha-proton is abstracted by an enzyme base protected from exchange with solvent. These conclusions are supported by substrate alpha-deuterium isotope effects and by solvent viscosity effects on sulfite binding.

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Year:  2000        PMID: 10706608      PMCID: PMC15954          DOI: 10.1073/pnas.040559797

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  The active site of spinach glycolate oxidase.

Authors:  Y Lindqvist; C I Brändén
Journal:  J Biol Chem       Date:  1989-02-25       Impact factor: 5.157

2.  Three-dimensional structure of flavocytochrome b2 from baker's yeast at 3.0-A resolution.

Authors:  Z X Xia; N Shamala; P H Bethge; L W Lim; H D Bellamy; N H Xuong; F Lederer; F S Mathews
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

3.  Studies on the mechanism of action of the flavoenzyme lactate oxidase. Oxidation and elimination with beta-chlorolactate.

Authors:  C Walsh; O Lockridge; V Massey; R Abeles
Journal:  J Biol Chem       Date:  1973-10-25       Impact factor: 5.157

4.  Active-site probes of flavoproteins.

Authors:  V Massey; P Hemmerich
Journal:  Biochem Soc Trans       Date:  1980-06       Impact factor: 5.407

5.  Use of free energy relationships to probe the individual steps of hydroxylation of p-hydroxybenzoate hydroxylase: studies with a series of 8-substituted flavins.

Authors:  M Ortiz-Maldonado; D P Ballou; V Massey
Journal:  Biochemistry       Date:  1999-06-22       Impact factor: 3.162

6.  8-Mercaptoflavins as active site probes of flavoenzymes.

Authors:  V Massey; S Ghisla; E G Moore
Journal:  J Biol Chem       Date:  1979-10-10       Impact factor: 5.157

7.  L-lactate oxidase and L-lactate monooxygenase: mechanistic variations on a common structural theme.

Authors:  K Maeda-Yorita; K Aki; H Sagai; H Misaki; V Massey
Journal:  Biochimie       Date:  1995       Impact factor: 4.079

8.  Molecular structure of flavocytochrome b2 at 2.4 A resolution.

Authors:  Z X Xia; F S Mathews
Journal:  J Mol Biol       Date:  1990-04-20       Impact factor: 5.469

9.  Spinach glycolate oxidase and yeast flavocytochrome b2 are structurally homologous and evolutionarily related enzymes with distinctly different function and flavin mononucleotide binding.

Authors:  Y Lindqvist; C I Brändén; F S Mathews; F Lederer
Journal:  J Biol Chem       Date:  1991-02-15       Impact factor: 5.157

10.  Active site probes of flavoproteins. Determination of the solvent accessibility of the flavin position 8 for a series of flavoproteins.

Authors:  L M Schopfer; V Massey; A Claiborne
Journal:  J Biol Chem       Date:  1981-07-25       Impact factor: 5.157

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  9 in total

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4.  Flavoproteins are potential targets for the antibiotic roseoflavin in Escherichia coli.

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Journal:  J Bacteriol       Date:  2013-07-08       Impact factor: 3.490

5.  Interaction of two arginine residues in lactate oxidase with the enzyme flavin: conversion of FMN to 8-formyl-FMN.

Authors:  K Yorita; T Matsuoka; H Misaki; V Massey
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

6.  Host-directed evolution of a novel lactate oxidase in Streptococcus iniae isolates from barramundi (Lates calcarifer).

Authors:  Roslina A Nawawi; Justice C F Baiano; E Charlotte E Kvennefors; Andrew C Barnes
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

7.  Unique Biochemical and Sequence Features Enable BluB To Destroy Flavin and Distinguish BluB from the Flavin Monooxygenase Superfamily.

Authors:  Amrita B Hazra; David P Ballou; Michiko E Taga
Journal:  Biochemistry       Date:  2018-03-07       Impact factor: 3.162

8.  O2 reactivity of flavoproteins: dynamic access of dioxygen to the active site and role of a H+ relay system in D-amino acid oxidase.

Authors:  Jan Saam; Elena Rosini; Gianluca Molla; Klaus Schulten; Loredano Pollegioni; Sandro Ghisla
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

9.  Mechanism of Reconstitution/Activation of the Soluble PQQ-Dependent Glucose Dehydrogenase from Acinetobacter calcoaceticus: A Comprehensive Study.

Authors:  Claire Stines-Chaumeil; François Mavré; Brice Kauffmann; Nicolas Mano; Benoît Limoges
Journal:  ACS Omega       Date:  2020-01-23
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