Literature DB >> 10706254

Open annotation offers a democratic solution to genome sequencing.

T Hubbard, E Birney.   

Abstract

Mesh：

Year:  2000        PMID： 10706254     DOI： 10.1038/35002770

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


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  10 in total

1.  The Ensembl genome database project.

Authors:  T Hubbard; D Barker; E Birney; G Cameron; Y Chen; L Clark; T Cox; J Cuff; V Curwen; T Down; R Durbin; E Eyras; J Gilbert; M Hammond; L Huminiecki; A Kasprzyk; H Lehvaslaiho; P Lijnzaad; C Melsopp; E Mongin; R Pettett; M Pocock; S Potter; A Rust; E Schmidt; S Searle; G Slater; J Smith; W Spooner; A Stabenau; J Stalker; E Stupka; A Ureta-Vidal; I Vastrik; M Clamp
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  Computational inference of homologous gene structures in the human genome.

Authors:  R F Yeh; L P Lim; C B Burge
Journal:  Genome Res       Date:  2001-05       Impact factor: 9.043

3.  Ensembl 2002: accommodating comparative genomics.

Authors:  M Clamp; D Andrews; D Barker; P Bevan; G Cameron; Y Chen; L Clark; T Cox; J Cuff; V Curwen; T Down; R Durbin; E Eyras; J Gilbert; M Hammond; T Hubbard; A Kasprzyk; D Keefe; H Lehvaslaiho; V Iyer; C Melsopp; E Mongin; R Pettett; S Potter; A Rust; E Schmidt; S Searle; G Slater; J Smith; W Spooner; A Stabenau; J Stalker; E Stupka; A Ureta-Vidal; I Vastrik; E Birney
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

4.  yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes.

Authors:  Matthew D Wilkerson; Shannon D Schlueter; Volker Brendel
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

5.  PDBWiki: added value through community annotation of the Protein Data Bank.

Authors:  Henning Stehr; Jose M Duarte; Michael Lappe; Jong Bhak; Dan M Bolser
Journal:  Database (Oxford)       Date:  2010-07-06       Impact factor: 3.451

6.  Next generation tools for genomic data generation, distribution, and visualization.

Authors:  David A Nix; Tonya L Di Sera; Brian K Dalley; Brett A Milash; Robert M Cundick; Kevin S Quinn; Samir J Courdy
Journal:  BMC Bioinformatics       Date:  2010-09-09       Impact factor: 3.169

7.  Pseudomonas aeruginosa Genome Database and PseudoCAP: facilitating community-based, continually updated, genome annotation.

Authors:  Geoffrey L Winsor; Raymond Lo; Shannan J Ho Sui; Korine S E Ung; Shaoshan Huang; Dean Cheng; Wai-Kay Ho Ching; Robert E W Hancock; Fiona S L Brinkman
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

8.  GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts.

Authors:  Sébastien Aubourg; Véronique Brunaud; Clémence Bruyère; Mark Cock; Richard Cooke; Annick Cottet; Arnaud Couloux; Patrice Déhais; Gilbert Deléage; Aymeric Duclert; Manuel Echeverria; Aimée Eschbach; Denis Falconet; Ghislain Filippi; Christine Gaspin; Christophe Geourjon; Jean-Michel Grienenberger; Guy Houlné; Elisabeth Jamet; Frédéric Lechauve; Olivier Leleu; Philippe Leroy; Régis Mache; Christian Meyer; Hafed Nedjari; Ioan Negrutiu; Valérie Orsini; Eric Peyretaillade; Cyril Pommier; Jeroen Raes; Jean-Loup Risler; Stéphane Rivière; Stéphane Rombauts; Pierre Rouzé; Michel Schneider; Philippe Schwob; Ian Small; Ghislain Soumayet-Kampetenga; Darko Stankovski; Claire Toffano; Michael Tognolli; Michel Caboche; Alain Lecharny
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

9.  EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome.

Authors:  Françoise Thibaud-Nissen; Matthew Campbell; John P Hamilton; Wei Zhu; C Robin Buell
Journal:  BMC Genomics       Date:  2007-10-25       Impact factor: 3.969

10.  Integrated Systems for NGS Data Management and Analysis: Open Issues and Available Solutions.

Authors:  Valerio Bianchi; Arnaud Ceol; Alessandro G E Ogier; Stefano de Pretis; Eugenia Galeota; Kamal Kishore; Pranami Bora; Ottavio Croci; Stefano Campaner; Bruno Amati; Marco J Morelli; Mattia Pelizzola
Journal:  Front Genet       Date:  2016-05-06       Impact factor: 4.599
  10 in total

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