Literature DB >> 10701121

Gene content and organization of a 281-kbp contig from the genome of the extremely thermophilic archaeon, Sulfolobus solfataricus P2.

R L Charlebois1, R K Singh, C C Chan-Weiher, G Allard, C Chow, F Confalonieri, B Curtis, M Duguet, G Erauso, D Faguy, T Gaasterland, R A Garrett, P Gordon, A C Jeffries, C Kozera, N Kushwaha, E Lafleur, N Medina, X Peng, S L Penny, Q She, A St Jean, J van der Oost, F Young, Y Zivanovic, W F Doolittle, M A Ragan, C W Sensen.   

Abstract

The sequence of a 281-kbp contig from the crenarchaeote Sulfolobus solfataricus P2 was determined and analysed. Notable features in this region include 29 ribosomal protein genes, 12 tRNA genes (four of which contain archaeal-type introns), operons encoding enzymes of histidine biosynthesis, pyrimidine biosynthesis, and arginine biosynthesis, an ATPase operon, numerous genes for enzymes of lipopolysaccharide biosynthesis, and six insertion sequences. The content and organization of this contig are compared with sequences from crenarchaeotes, euryarchaeotes, bacteria, and eukaryotes.

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Year:  2000        PMID： 10701121     DOI： 10.1139/g99-108

Source DB:  PubMed          Journal:  Genome        ISSN： 0831-2796            Impact factor:   2.166


  6 in total

1.  The complete genome of the crenarchaeon Sulfolobus solfataricus P2.

Authors:  Q She; R K Singh; F Confalonieri; Y Zivanovic; G Allard; M J Awayez; C C Chan-Weiher; I G Clausen; B A Curtis; A De Moors; G Erauso; C Fletcher; P M Gordon; I Heikamp-de Jong; A C Jeffries; C J Kozera; N Medina; X Peng; H P Thi-Ngoc; P Redder; M E Schenk; C Theriault; N Tolstrup; R L Charlebois; W F Doolittle; M Duguet; T Gaasterland; R A Garrett; M A Ragan; C W Sensen; J Van der Oost
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

2.  Decoding the genomic tree of life.

Authors:  Anne B Simonson; Jacqueline A Servin; Ryan G Skophammer; Craig W Herbold; Maria C Rivera; James A Lake
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-25       Impact factor: 11.205

3.  Mutations and rearrangements in the genome of Sulfolobus solfataricus P2.

Authors:  Peter Redder; Roger A Garrett
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

4.  Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach.

Authors:  E V Koonin; Y I Wolf; L Aravind
Journal:  Genome Res       Date:  2001-02       Impact factor: 9.043

5.  Mutation and reversion frequencies of different Sulfolobus species and strains.

Authors:  Silvia Berkner; Georg Lipps
Journal:  Extremophiles       Date:  2008-01-05       Impact factor: 2.395

6.  UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.

Authors:  Krishnamurthy N Rao; Stephen K Burley; Subramanyam Swaminathan
Journal:  PLoS One       Date:  2008-12-11       Impact factor: 3.240
  6 in total

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