Literature DB >> 10673004

Novel intergenic repeats of Escherichia coli K-12.

K E Rudd1.   

Abstract

An online catalog of intergenic DNA repeat sequence elements is added to the EcoGene Escherichia coli K-12 genome sequence annotation and analysis project (bmb.med.miami.edu/EcoGene). A library of noncoding (intergenic) DNA sequences depleted of known intergenic repeat classes was searched for DNA sequence similarities to identify novel DNA repeat sequence classes.

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Year:  1999        PMID： 10673004     DOI： 10.1016/s0923-2508(99)00126-6

Source DB:  PubMed          Journal:  Res Microbiol        ISSN： 0923-2508            Impact factor:   3.992


  19 in total

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2.  A computational approach to identify genes for functional RNAs in genomic sequences.

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3.  TorI, a response regulator inhibitor of phage origin in Escherichia coli.

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4.  DnaJ (Hsp40 protein) binding to folded substrate impacts KplE1 prophage excision efficiency.

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Review 5.  Every little piece counts: the many faces of tRNA transcripts.

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7.  Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arrays.

Authors:  Brian Tjaden; Rini Mukherjee Saxena; Sergey Stolyar; David R Haynor; Eugene Kolker; Carsten Rosenow
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

8.  RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria.

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Review 9.  Prevalence of small base-pairing RNAs derived from diverse genomic loci.

Authors:  Philip P Adams; Gisela Storz
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-03-05       Impact factor: 4.490

10.  De novo computational prediction of non-coding RNA genes in prokaryotic genomes.

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Journal:  Bioinformatics       Date:  2009-09-10       Impact factor: 6.937
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