Literature DB >> 10669593

Solution structure and dynamics of the DNA-binding domain of the adipocyte-transcription factor FREAC-11.

M J van Dongen1, A Cederberg, P Carlsson, S Enerbäck, M Wikström.   

Abstract

Transcription factors of the forkhead type share a highly conserved DNA-binding domain of about 100 amino acid residues. FREAC-11, expressed in adipocytes, belongs to this class. Here, we report on NMR studies that established the three-dimensional structure of the FREAC-11, DNA-binding domain. Although apparent similarities to the structures of other members within the forkhead family are observed, the structure also reveals some remarkable differences. Along with the complementary dynamics, the data provide insight into the fundamentals of sequence specificity within a highly conserved motif. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10669593     DOI: 10.1006/jmbi.1999.3476

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  15 in total

1.  Essential structural and functional determinants within the forkhead domain of FOXC1.

Authors:  R A Saleem; S Banerjee-Basu; T C Murphy; A Baxevanis; M A Walter
Journal:  Nucleic Acids Res       Date:  2004-08-06       Impact factor: 16.971

2.  Solution structure of the human HSPC280 protein.

Authors:  Jinzhong Lin; Tao Zhou; Jinfeng Wang
Journal:  Protein Sci       Date:  2011-01       Impact factor: 6.725

Review 3.  In control of biology: of mice, men and Foxes.

Authors:  Patrick J E C Wijchers; J Peter H Burbach; Marten P Smidt
Journal:  Biochem J       Date:  2006-07-15       Impact factor: 3.857

4.  Protein conformational flexibility prediction using machine learning.

Authors:  Oleg Trott; Keri Siggers; Burkhard Rost; Arthur G Palmer
Journal:  J Magn Reson       Date:  2008-02-01       Impact factor: 2.229

5.  Solution structure and backbone dynamics of the DNA-binding domain of FOXP1: insight into its domain swapping and DNA binding.

Authors:  Yuan-Ping Chu; Chia-Hao Chang; Jia-Hau Shiu; Yao-Tsung Chang; Chiu-Yueh Chen; Woei-Jer Chuang
Journal:  Protein Sci       Date:  2011-04-11       Impact factor: 6.725

6.  A Single Amino Acid in the Hinge Loop Region of the FOXP Forkhead Domain is Significant for Dimerisation.

Authors:  Kershia Perumal; Heini W Dirr; Sylvia Fanucchi
Journal:  Protein J       Date:  2015-04       Impact factor: 2.371

7.  1H, 13C and 15N resonance assignments of the DNA binding domain of the human forkhead transcription factor AFX.

Authors:  J Weigelt; I Climent; K Dahlman-Wright; M Wikström
Journal:  J Biomol NMR       Date:  2000-06       Impact factor: 2.835

8.  Homozygous FOXE3 mutations cause non-syndromic, bilateral, total sclerocornea, aphakia, microphthalmia and optic disc coloboma.

Authors:  Manir Ali; Beatriz Buentello-Volante; Martin McKibbin; J Alberto Rocha-Medina; Narcis Fernandez-Fuentes; Wilson Koga-Nakamura; Aruna Ashiq; Kamron Khan; Adam P Booth; Grange Williams; Yasmin Raashid; Hussain Jafri; Aine Rice; Chris F Inglehearn; Juan Carlos Zenteno
Journal:  Mol Vis       Date:  2010-06-23       Impact factor: 2.367

9.  Structural basis for DNA recognition by FoxO1 and its regulation by posttranslational modification.

Authors:  Michael M Brent; Ruchi Anand; Ronen Marmorstein
Journal:  Structure       Date:  2008-09-10       Impact factor: 5.006

10.  Amino acid substitutions in a long flexible sequence influence thermodynamics and internal dynamic properties of winged helix protein genesis and its DNA complex.

Authors:  Hong Yan; Xiubei Liao
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

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