Literature DB >> 10669421

Evidence for DNA loss as a determinant of genome size.

D A Petrov1, T A Sangster, J S Johnston, D L Hartl, K L Shaw.   

Abstract

Eukaryotic genome sizes range over five orders of magnitude. This variation cannot be explained by differences in organismic complexity (the C value paradox). To test the hypothesis that some variation in genome size can be attributed to differences in the patterns of insertion and deletion (indel) mutations among organisms, this study examines the indel spectrum in Laupala crickets, which have a genome size 11 times larger than that of Drosophila. Consistent with the hypothesis, DNA loss is more than 40 times slower in Laupala than in Drosophila.

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Year:  2000        PMID: 10669421     DOI: 10.1126/science.287.5455.1060

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  115 in total

1.  A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion.

Authors:  K Shirasu; A H Schulman; T Lahaye; P Schulze-Lefert
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

2.  Mapping unexplored genomes: a genetic linkage map of the Hawaiian cricket Laupala.

Authors:  Y M Parsons; K L Shaw
Journal:  Genetics       Date:  2002-11       Impact factor: 4.562

3.  Retroposed new genes out of the X in Drosophila.

Authors:  Esther Betrán; Kevin Thornton; Manyuan Long
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

Review 4.  Comparative genomics in the grass family: molecular characterization of grass genome structure and evolution.

Authors:  Catherine Feuillet; Beat Keller
Journal:  Ann Bot       Date:  2002-01       Impact factor: 4.357

5.  Is the rate of insertion and deletion mutation male biased?: Molecular evolutionary analysis of avian and primate sex chromosome sequences.

Authors:  Hannah Sundström; Matthew T Webster; Hans Ellegren
Journal:  Genetics       Date:  2003-05       Impact factor: 4.562

6.  Genome size evolution in pufferfish: a comparative analysis of diodontid and tetraodontid pufferfish genomes.

Authors:  Daniel E Neafsey; Stephen R Palumbi
Journal:  Genome Res       Date:  2003-05       Impact factor: 9.043

7.  First nuclear DNA C-values for 28 angiosperm genera.

Authors:  Lynda Hanson; Rebecca L Brown; Amy Boyd; Margaret A T Johnson; Michael D Bennett
Journal:  Ann Bot       Date:  2003-01       Impact factor: 4.357

8.  Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice.

Authors:  Jianxin Ma; Katrien M Devos; Jeffrey L Bennetzen
Journal:  Genome Res       Date:  2004-04-12       Impact factor: 9.043

Review 9.  A guided tour of large genome size in animals: what we know and where we are heading.

Authors:  France Dufresne; Nicholas Jeffery
Journal:  Chromosome Res       Date:  2011-10       Impact factor: 5.239

10.  Long deletion hot spots inside retrotransposon 297.

Authors:  I A Glukhov; V B Salenko; Y E Stefanov; Y V Ilyin
Journal:  Dokl Biochem Biophys       Date:  2012-07-08       Impact factor: 0.788

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