Literature DB >> 10660441

Spin-stretching of DNA and protein molecules for detection by fluorescence and atomic force microscopy.

H Yokota1, J Sunwoo, M Sarikaya, G van den Engh, R Aebersold.   

Abstract

We have developed a rapid and efficient way of stretching DNA and denatured protein molecules for detection by fluorescence microscopy and atomic force microscopy (AFM). In the described method, a viscous drag created by transient rotational flow stretches randomly coiled DNA molecules or denatured proteins. Stretching is achieved by dispensing a droplet of sample solution containing DNA or denatured protein on a MgCl2-soaked mica surface. We present fluorescent images of straightened lambdaDNA molecules and AFM images of stress-shared, reduced von Willebrand factor as well as straightened lambdaDNA. The described quick and reliable spin-stretching technique will find wide applications in the analysis of single biopolymer molecules.

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Year:  1999        PMID: 10660441     DOI: 10.1021/ac9902695

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  7 in total

1.  AFM of self-assembled lambda DNA-histone networks.

Authors:  YuYing Liu; Martin Guthold; Matthew J Snyder; HongFeng Lu
Journal:  Colloids Surf B Biointerfaces       Date:  2015-06-19       Impact factor: 5.268

2.  Sub-10-nm imaging of nucleic acids using spectroscopic intrinsic-contrast photon-localization optical nanoscopy (SICLON).

Authors:  Adam Eshein; Yue Li; Biqin Dong; Luay M Almassalha; John E Chandler; The-Quyen Nguyen; Karl A Hujsak; Vinayak P Dravid; Cheng Sun; Hao F Zhang; Vadim Backman
Journal:  Opt Lett       Date:  2018-12-01       Impact factor: 3.776

3.  Low-cost fabrication of centimetre-scale periodic arrays of single plasmid DNA molecules.

Authors:  Brett Kirkland; Zhibin Wang; Peipei Zhang; Shin-Ichiro Takebayashi; Steven Lenhert; David M Gilbert; Jingjiao Guan
Journal:  Lab Chip       Date:  2013-07-04       Impact factor: 6.799

4.  Enzymatic digestion of single DNA molecules anchored on nanogold-modified surfaces.

Authors:  Junhong Lü; Ming Ye; Na Duan; Bin Li
Journal:  Nanoscale Res Lett       Date:  2009-05-31       Impact factor: 4.703

5.  AFM of biological complexes: what can we learn?

Authors:  Maria Gaczynska; Pawel A Osmulski
Journal:  Curr Opin Colloid Interface Sci       Date:  2008-10       Impact factor: 6.448

6.  Novel glass slide preparation system for single DNA molecules analysis.

Authors:  Alexander Zarkov; Stoyno Stoynov; Marina Nedelcheva-Veleva
Journal:  Biotechnol Biotechnol Equip       Date:  2014-01-02       Impact factor: 1.632

7.  Combing of genomic DNA from droplets containing picograms of material.

Authors:  Jochem Deen; Wouter Sempels; Raf De Dier; Jan Vermant; Peter Dedecker; Johan Hofkens; Robert K Neely
Journal:  ACS Nano       Date:  2015-01-08       Impact factor: 15.881

  7 in total

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