Literature DB >> 10656926

An integrated linkage-radiation hybrid map of the canine genome.

C S Mellersh1, C Hitte, M Richman, F Vignaux, C Priat, S Jouquand, P Werner, C André, S DeRose, D F Patterson, E A Ostrander, F Galibert.   

Abstract

Purebred dogs are a unique resource for dissecting the molecular basis of simple and complex genetic diseases and traits. As a result of strong selection for physical and behavioral characteristics among the 300 established breeds, modern dogs are characterized by high levels of interbreed variation, complemented by significant intrabreed homogeneity. A high-resolution map of the canine genome is necessary to exploit the mapping power of this unusual resource. We describe here the integration of an expanded canine radiation hybrid map, comprised of 600 markers, with the latest linkage map of 341 markers, to generate a map of 724 markers-the densest map of the canine genome described to date. Through the inclusion of 217 markers on both the linkage and RH maps, the 77 RH groups are reduced to 44 syntenic groups, thus providing comprehensive coverage of most of the canine genome.

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Mesh:

Year:  2000        PMID: 10656926     DOI: 10.1007/s003350010024

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  32 in total

1.  The comprehensive mouse radiation hybrid map densely cross-referenced to the recombination map: a tool to support the sequence assemblies.

Authors:  Lucy B Rowe; Mary E Barter; Jennifer A Kelmenson; Janan T Eppig
Journal:  Genome Res       Date:  2003-01       Impact factor: 9.043

2.  The keeshond defect in cardiac conotruncal development is oligogenic.

Authors:  Petra Werner; Michael G Raducha; Ulana Prociuk; Elaine A Ostrander; Richard S Spielman; Ewen F Kirkness; Donald F Patterson; Paula S Henthorn
Journal:  Hum Genet       Date:  2005-02-12       Impact factor: 4.132

3.  Radiation hybrid mapping of the canine type I and type IV collagen gene subfamilies.

Authors:  Jennifer K Lowe; Richard Guyon; Melissa L Cox; Dianne C Mitchell; Amy L Lonkar; Frode Lingaas; Catherine André; Francis Galibert; Elaine A Ostrander; Keith E Murphy
Journal:  Funct Integr Genomics       Date:  2003-03-27       Impact factor: 3.410

4.  Chromosome-specific single-locus FISH probes allow anchorage of an 1800-marker integrated radiation-hybrid/linkage map of the domestic dog genome to all chromosomes.

Authors:  M Breen; S Jouquand; C Renier; C S Mellersh; C Hitte; N G Holmes; A Chéron; N Suter; F Vignaux; A E Bristow; C Priat; E McCann; C André; S Boundy; P Gitsham; R Thomas; W L Bridge; H F Spriggs; E J Ryder; A Curson; J Sampson; E A Ostrander; M M Binns; F Galibert
Journal:  Genome Res       Date:  2001-10       Impact factor: 9.043

5.  Canine Imerslund-Gräsbeck syndrome maps to a region orthologous to HSA14q.

Authors:  Qianchuan He; John C Fyfe; Alejandro A Schäffer; Adam Kilkenney; Petra Werner; Ewen F Kirkness; Paula S Henthorn
Journal:  Mamm Genome       Date:  2003-11       Impact factor: 2.957

6.  The cnm locus, a canine homologue of human autosomal forms of centronuclear myopathy, maps to chromosome 2.

Authors:  Laurent Tiret; Stéphane Blot; Jean-Louis Kessler; Hugues Gaillot; Matthew Breen; Jean-Jacques Panthier
Journal:  Hum Genet       Date:  2003-07-23       Impact factor: 4.132

7.  Survey sequencing and radiation hybrid mapping to construct comparative maps.

Authors:  Christophe Hitte; Ewen F Kirkness; Elaine A Ostrander; Francis Galibert
Journal:  Methods Mol Biol       Date:  2008

8.  Finding cardiovascular disease genes in the dog.

Authors:  Heidi G Parker; Kathryn M Meurs; Elaine A Ostrander
Journal:  J Vet Cardiol       Date:  2006-10-10       Impact factor: 1.701

9.  Natural selection on marine carnivores elaborated a diverse family of classical MHC class I genes exhibiting haplotypic gene content variation and allelic polymorphism.

Authors:  John A Hammond; Lisbeth A Guethlein; Paul J Norman; Peter Parham
Journal:  Immunogenetics       Date:  2012-09-22       Impact factor: 2.846

10.  A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis.

Authors:  R Thomas; S E Duke; E K Karlsson; A Evans; P Ellis; K Lindblad-Toh; C F Langford; M Breen
Journal:  Cytogenet Genome Res       Date:  2008-12-18       Impact factor: 1.636

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