Literature DB >> 10655643

Detection of the dipicolinic acid biomarker in Bacillus spores using Curie-point pyrolysis mass spectrometry and Fourier transform infrared spectroscopy.

R Goodacre1, B Shann, R J Gilbert, E M Timmins, A C McGovern, B K Alsberg, D B Kell, N A Logan.   

Abstract

Thirty-six strains of aerobic endospore-forming bacteria confirmed by polyphasic taxonomic methods to belong to Bacillus amyloliquefaciens, Bacillus cereus, Bacillus licheniformis, Bacillus megaterium, Bacillus subtilis (including Bacillus niger and Bacillus globigii), Bacillus sphaericus, and Brevi laterosporus were grown axenically on nutrient agar, and vegetative and sporulated biomasses were analyzed by Curie-point pyrolysis mass spectrometry (PyMS) and diffuse reflectance-absorbance Fourier-transform infrared spectroscopy (FT-IR). Chemometric methods based on rule induction and genetic programming were used to determine the physiological state (vegetative cells or spores) correctly, and these methods produced mathematical rules which could be simply interpreted in biochemical terms. For PyMS it was found that m/z 105 was characteristic and is a pyridine ketonium ion (C6H3ON+) obtained from the pyrolysis of dipicolinic acid (pyridine-2,6-dicarboxylic acid; DPA), a substance found in spores but not in vegetative cells; this was confirmed using pyrolysis-gas chromatography/mass spectrometry. In addition, a pyridine ring vibration at 1447-1439 cm-1 from DPA was found to be highly characteristic of spores in FT-IR analysis. Thus, although the original data sets recorded hundreds of spectral variables from whole cells simultaneously, a simple biomarker can be used for the rapid and unequivocal detection of spores of these organisms.

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Year:  2000        PMID: 10655643     DOI: 10.1021/ac990661i

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  28 in total

1.  Investigating microbial (micro)colony heterogeneity by vibrational spectroscopy.

Authors:  L P Choo-Smith; K Maquelin; T van Vreeswijk; H A Bruining; G J Puppels; N A Ngo Thi; C Kirschner; D Naumann; D Ami; A M Villa; F Orsini; S M Doglia; H Lamfarraj; G D Sockalingum; M Manfait; P Allouch; H P Endtz
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

Review 2.  Metabolomics--the link between genotypes and phenotypes.

Authors:  Oliver Fiehn
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

3.  Flow-injection electrospray ionization mass spectrometry of crude cell extracts for high-throughput bacterial identification.

Authors:  Seetharaman Vaidyanathan; Douglas B Kell; Royston Goodacre
Journal:  J Am Soc Mass Spectrom       Date:  2002-02       Impact factor: 3.109

4.  Rapid and quantitative detection of the microbial spoilage of meat by fourier transform infrared spectroscopy and machine learning.

Authors:  David I Ellis; David Broadhurst; Douglas B Kell; Jem J Rowland; Royston Goodacre
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

5.  Plant metabolomics: the missing link in functional genomics strategies.

Authors:  Robert Hall; Mike Beale; Oliver Fiehn; Nigel Hardy; Lloyd Sumner; Raoul Bino
Journal:  Plant Cell       Date:  2002-07       Impact factor: 11.277

Review 6.  Metabolic profiles to define the genome: can we hear the phenotypes?

Authors:  Julian L Griffin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-06-29       Impact factor: 6.237

7.  Endophytic Paenibacillus amylolyticus KMCLE06 Extracted Dipicolinic Acid as Antibacterial Agent Derived via Dipicolinic Acid Synthetase Gene.

Authors:  Kanmani Anandan; Ravishankar Rai Vittal
Journal:  Curr Microbiol       Date:  2018-11-29       Impact factor: 2.188

8.  Convergence of goals: phylogenetical, morphological, and physiological characterization of tolerance to drought stress in tall fescue (Festuca arundinacea Schreb.).

Authors:  Mohammadreza Salehi; Hassan Salehi; Hassan xNiazi; Cyrus Ghobadi
Journal:  Mol Biotechnol       Date:  2014-03       Impact factor: 2.695

9.  Laboratory results and mathematical modeling of spore surface interactions in stormwater runoff.

Authors:  Anne M Mikelonis; Katherine Ratliff; Sungmin Youn
Journal:  J Contam Hydrol       Date:  2020-08-29       Impact factor: 3.188

10.  Metabolic discrimination of Catharanthus roseus leaves infected by phytoplasma using 1H-NMR spectroscopy and multivariate data analysis.

Authors:  Young Hae Choi; Elisabet Casas Tapias; Hye Kyong Kim; Alfons W M Lefeber; Cornelis Erkelens; Jacobus Th J Verhoeven; Jernej Brzin; Jana Zel; Robert Verpoorte
Journal:  Plant Physiol       Date:  2004-07-30       Impact factor: 8.340

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