Literature DB >> 10653792

Distribution of halothane in a dipalmitoylphosphatidylcholine bilayer from molecular dynamics calculations.

L Koubi1, M Tarek, M L Klein, D Scharf.   

Abstract

We report a 2-ns constant pressure molecular dynamics simulation of halothane, at a mol fraction of 50%, in the hydrated liquid crystal bilayer phase of dipalmitoylphosphatidylcholine. Halothane molecules are found to preferentially segregate to the upper part of the lipid acyl chains, with a maximum probability near the C(5) methylene groups. However, a finite probability is also observed along the tail region and across the methyl trough. Over 95% of the halothane molecules are located below the lipid carbonyl carbons, in agreement with photolabeling experiments. Halothane induces lateral expansion and a concomitant contraction in the bilayer thickness. A decrease in the acyl chain segment order parameters, S(CD), for the tail portion, and a slight increase for the upper portion compared to neat bilayers, are in agreement with several NMR studies on related systems. The decrease in S(CD) is attributed to a larger accessible volume per lipid in the tail region. Significant changes in the electric properties of the lipid bilayer result from the structural changes, which include a shift and broadening of the choline headgroup dipole (P-N) orientation distribution. Our findings reconcile apparent controversial conclusions from experiments on diverse lipid systems.

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Year:  2000        PMID: 10653792      PMCID: PMC1300682          DOI: 10.1016/S0006-3495(00)76637-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  The structure of lipid bilayers and the effects of general anaesthetics. An x-ray and neutron diffraction study.

Authors:  N P Franks; W R Lieb
Journal:  J Mol Biol       Date:  1979-10-09       Impact factor: 5.469

2.  Neutron diffraction studies on phosphatidylcholine model membranes. I. Head group conformation.

Authors:  G Büldt; H U Gally; J Seelig; G Zaccai
Journal:  J Mol Biol       Date:  1979-11-15       Impact factor: 5.469

Review 3.  Molecular mechanisms of general anaesthesia.

Authors:  N P Franks; W R Lieb
Journal:  Nature       Date:  1982-12-09       Impact factor: 49.962

Review 4.  The nature of the site of general anesthesia.

Authors:  K W Miller
Journal:  Int Rev Neurobiol       Date:  1985       Impact factor: 3.230

5.  Do clinical levels of general anaesthetics affect lipid bilayers? Evidence from Raman scattering.

Authors:  W R Lieb; M Kovalycsik; R Mendelsohn
Journal:  Biochim Biophys Acta       Date:  1982-06-14

6.  Do general anaesthetics act by competitive binding to specific receptors?

Authors:  N P Franks; W R Lieb
Journal:  Nature       Date:  1984 Aug 16-22       Impact factor: 49.962

7.  Effects of halothane on dipalmitoylphosphatidylcholine liposomes: a Raman spectroscopic study.

Authors:  N C Craig; G J Bryant; I W Levin
Journal:  Biochemistry       Date:  1987-05-05       Impact factor: 3.162

8.  400 MHz two-dimensional nuclear Overhauser spectroscopy on anesthetic interaction with lipid bilayer.

Authors:  S Yokono; K Ogli; S Miura; I Ueda
Journal:  Biochim Biophys Acta       Date:  1989-07-10

9.  Infrared spectra of phospholipid membranes: interfacial dehydration by volatile anesthetics and phase transition.

Authors:  Y S Tsai; S M Ma; S Nishimura; I Ueda
Journal:  Biochim Biophys Acta       Date:  1990-02-28

10.  The partial molar volumes of anesthetics in lipid bilayers.

Authors:  Y Kita; L J Bennett; K W Miller
Journal:  Biochim Biophys Acta       Date:  1981-09-21
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  28 in total

1.  Partitioning and localization of environment-sensitive 2-(2'-pyridyl)- and 2-(2'-pyrimidyl)-indoles in lipid membranes: a joint refinement using fluorescence measurements and molecular dynamics simulations.

Authors:  Alexander Kyrychenko; Feiyue Wu; Randolph P Thummel; Jacek Waluk; Alexey S Ladokhin
Journal:  J Phys Chem B       Date:  2010-10-28       Impact factor: 2.991

2.  Computer simulation of small molecule permeation across a lipid bilayer: dependence on bilayer properties and solute volume, size, and cross-sectional area.

Authors:  D Bemporad; C Luttmann; J W Essex
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

3.  2H-NMR study and molecular dynamics simulation of the location, alignment, and mobility of pyrene in POPC bilayers.

Authors:  Barbara Hoff; Erik Strandberg; Anne S Ulrich; D Peter Tieleman; Clemens Posten
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

4.  Alzheimer's disease: halothane induces Abeta peptide to oligomeric form--solution NMR studies.

Authors:  Pravat K Mandal; Jay W Pettegrew; Dennish W McKeag; Ratna Mandal
Journal:  Neurochem Res       Date:  2006-06-29       Impact factor: 3.996

5.  Concentration effects of volatile anesthetics on the properties of model membranes: a coarse-grain approach.

Authors:  Mónica Pickholz; Leonor Saiz; Michael L Klein
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

6.  Under the influence of alcohol: the effect of ethanol and methanol on lipid bilayers.

Authors:  Michael Patra; Emppu Salonen; Emma Terama; Ilpo Vattulainen; Roland Faller; Bryan W Lee; Juha Holopainen; Mikko Karttunen
Journal:  Biophys J       Date:  2005-12-02       Impact factor: 4.033

7.  Interaction of anesthetics with open and closed conformations of a potassium channel studied via molecular dynamics and normal mode analysis.

Authors:  Satyavani Vemparala; Carmen Domene; Michael L Klein
Journal:  Biophys J       Date:  2008-02-29       Impact factor: 4.033

Review 8.  Anaesthetic mechanisms: update on the challenge of unravelling the mystery of anaesthesia.

Authors:  Andrea Kopp Lugli; Charles Spencer Yost; Christoph H Kindler
Journal:  Eur J Anaesthesiol       Date:  2009-10       Impact factor: 4.330

9.  Isovaleric, methylmalonic, and propionic acid decrease anesthetic EC50 in tadpoles, modulate glycine receptor function, and interact with the lipid 1,2-dipalmitoyl-Sn-glycero-3-phosphocholine.

Authors:  Yun Weng; Tienyi Theresa Hsu; Jing Zhao; Stefanie Nishimura; Gerald G Fuller; James M Sonner
Journal:  Anesth Analg       Date:  2009-05       Impact factor: 5.108

Review 10.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

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