Literature DB >> 10642510

The gene for human TATA-binding-protein-associated factor (TAFII) 170: structure, promoter and chromosomal localization.

J A Van Der Knaap1, V Van Den Boom, J Kuipers, M J Van Eijk, P C Van Der Vliet, H T Timmers.   

Abstract

The TATA-binding protein (TBP) plays a central role in eukaryotic transcription and forms protein complexes with TBP-associated factors (TAFs). The genes encoding TAF(II) proteins frequently map to chromosomal regions altered in human neoplasias. TAF(II)170 of B-TFIID is a member of the SF2 superfamily of putative helicases. Members of this superfamily have also been implicated in several human genetic disorders. In this study we have isolated human genomic clones encoding TAF(II)170 and we show that the gene contains 37 introns. Ribonuclease-protection experiments revealed that TAF(II)170 has multiple transcription start sites, consistent with the observation that the promoter lacks a canonical TATA box and initiator element. Deletion analysis of the promoter region showed that a fragment of 264 bp is sufficient to direct transcription. In addition, we determined the chromosomal localization by two independent methods which mapped the gene to human chromosome 10q22-q23 between the markers D10S185 and WI-1183. The region surrounding these markers has been implicated in several human disorders.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10642510      PMCID: PMC1220786          DOI: 10.1042/0264-6021:3450521

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  33 in total

1.  Control of DNA synthesis genes in budding yeast: involvement of the transcriptional modulator MOT1 in the expression of the DNA polymerase alpha gene.

Authors:  S Piatti; R Tazzi; A Pizzagalli; P Plevani; G Lucchini
Journal:  Chromosoma       Date:  1992       Impact factor: 4.316

Review 2.  Regulation of gene expression by TBP-associated proteins.

Authors:  T I Lee; R A Young
Journal:  Genes Dev       Date:  1998-05-15       Impact factor: 11.361

3.  MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data.

Authors:  K Quandt; K Frech; H Karas; E Wingender; T Werner
Journal:  Nucleic Acids Res       Date:  1995-12-11       Impact factor: 16.971

4.  MOT1 can activate basal transcription in vitro by regulating the distribution of TATA binding protein between promoter and nonpromoter sites.

Authors:  T A Muldrow; A M Campbell; P A Weil; D T Auble
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

5.  Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation.

Authors:  S Ruppert; E H Wang; R Tjian
Journal:  Nature       Date:  1993-03-11       Impact factor: 49.962

6.  The mammalian TFIID protein is present in two functionally distinct complexes.

Authors:  H T Timmers; P A Sharp
Journal:  Genes Dev       Date:  1991-11       Impact factor: 11.361

7.  Composition of transcription factor B-TFIID.

Authors:  H T Timmers; R E Meyers; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-01       Impact factor: 11.205

8.  Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus.

Authors:  Y W Jiang; D J Stillman
Journal:  Genes Dev       Date:  1996-03-01       Impact factor: 11.361

9.  Firefly luciferase gene: structure and expression in mammalian cells.

Authors:  J R de Wet; K V Wood; M DeLuca; D R Helinski; S Subramani
Journal:  Mol Cell Biol       Date:  1987-02       Impact factor: 4.272

10.  A presumptive helicase (MOT1 gene product) affects gene expression and is required for viability in the yeast Saccharomyces cerevisiae.

Authors:  J L Davis; R Kunisawa; J Thorner
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

View more
  3 in total

1.  High-affinity DNA binding by a Mot1p-TBP complex: implications for TAF-independent transcription.

Authors:  Orlando H Gumbs; Allyson M Campbell; P Anthony Weil
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

Review 2.  One small step for Mot1; one giant leap for other Swi2/Snf2 enzymes?

Authors:  Ramya Viswanathan; David T Auble
Journal:  Biochim Biophys Acta       Date:  2011-05-30

3.  Whole exome sequencing in females with autism implicates novel and candidate genes.

Authors:  Merlin G Butler; Syed K Rafi; Waheeda Hossain; Dietrich A Stephan; Ann M Manzardo
Journal:  Int J Mol Sci       Date:  2015-01-07       Impact factor: 5.923

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.