Literature DB >> 10620278

Mobility of adsorbed proteins: a Brownian dynamics study.

S Ravichandran1, J Talbot.   

Abstract

We simulate the adsorption of lysozyme on a solid surface, using Brownian dynamics simulations. A protein molecule is represented as a uniformly charged sphere and interacts with other molecules through screened Coulombic and double-layer forces. The simulation starts from an empty surface and attempts are made to introduce additional proteins at a fixed time interval that is inversely proportional to the bulk protein concentration. We examine the effect of ionic strength and bulk protein concentration on the adsorption kinetics over a range of surface coverages. The structure of the adsorbed layer is examined through snapshots of the configurations and quantitatively with the radial distribution function. We extract the surface diffusion coefficient from the mean square displacement. At high ionic strengths the Coulombic interaction is effectively shielded, leading to increased surface coverage. This effect is quantified with an effective particle radius. Clustering of the adsorbed molecules is promoted by high ionic strength and low bulk concentrations. We find that lateral protein mobility decreases with increasing surface coverage. The observed trends are consistent with previous theoretical and experimental studies.

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Year:  2000        PMID: 10620278      PMCID: PMC1300622          DOI: 10.1016/S0006-3495(00)76577-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  13 in total

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Journal:  Phys Rev Lett       Date:  1993-07-12       Impact factor: 9.161

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Journal:  Phys Rev Lett       Date:  1989-01-09       Impact factor: 9.161

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Journal:  Biophys J       Date:  1989-04       Impact factor: 4.033

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7.  Analysis of ordered arrays of adsorbed lysozyme by scanning tunneling microscopy.

Authors:  L Haggerty; A M Lenhoff
Journal:  Biophys J       Date:  1993-03       Impact factor: 4.033

8.  Total internal reflection/fluorescence photobleaching recovery study of serum albumin adsorption dynamics.

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Journal:  Biophys J       Date:  1981-03       Impact factor: 4.033

9.  2-D and 3-D Interactions in Random Sequential Adsorption of Charged Particles

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Journal:  J Colloid Interface Sci       Date:  1997-10-01       Impact factor: 8.128

10.  Protein adsorption on polymer surfaces: calculation of adsorption energies.

Authors:  D R Lu; K Park
Journal:  J Biomater Sci Polym Ed       Date:  1990       Impact factor: 3.517

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  8 in total

1.  Effects of excluded surface area and adsorbate clustering on surface adsorption of proteins. II. Kinetic models.

Authors:  A P Minton
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

2.  History dependence of protein adsorption kinetics.

Authors:  C Calonder; Y Tie; P R Van Tassel
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

3.  Kinetics and thermodynamics of protein adsorption: a generalized molecular theoretical approach.

Authors:  F Fang; I Szleifer
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

4.  Reorientational dynamics of enzymes adsorbed on quartz: a temperature-dependent time-resolved TIRF anisotropy study.

Authors:  C Czeslik; C Royer; T Hazlett; W Mantulin
Journal:  Biophys J       Date:  2003-04       Impact factor: 4.033

5.  Modelling of lysozyme binding to a cation exchange surface at atomic detail: the role of flexibility.

Authors:  Alexander Steudle; Jürgen Pleiss
Journal:  Biophys J       Date:  2011-06-22       Impact factor: 4.033

6.  Kinetic and thermodynamic control of protein adsorption.

Authors:  J Satulovsky; M A Carignano; I Szleifer
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

7.  A hard-sphere model of protein corona formation on spherical and cylindrical nanoparticles.

Authors:  Ian Rouse; Vladimir Lobaskin
Journal:  Biophys J       Date:  2021-09-08       Impact factor: 3.699

8.  Microfluidic deposition for resolving single-molecule protein architecture and heterogeneity.

Authors:  Francesco Simone Ruggeri; Jerome Charmet; Tadas Kartanas; Quentin Peter; Sean Chia; Johnny Habchi; Christopher M Dobson; Michele Vendruscolo; Tuomas P J Knowles
Journal:  Nat Commun       Date:  2018-09-24       Impact factor: 14.919

  8 in total

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