Literature DB >> 10618218

Generation of novel bacterial regulatory proteins that detect priority pollutant phenols.

A A Wise1, C R Kuske.   

Abstract

The genetic systems of bacteria that have the ability to use organic pollutants as carbon and energy sources can be adapted to create bacterial biosensors for the detection of industrial pollution. The creation of bacterial biosensors is hampered by a lack of information about the genetic systems that control production of bacterial enzymes that metabolize pollutants. We have attempted to overcome this problem through modification of DmpR, a regulatory protein for the phenol degradation pathway of Pseudomonas sp. strain CF600. The phenol detection capacity of DmpR was altered by using mutagenic PCR targeted to the DmpR sensor domain. DmpR mutants were identified that both increased sensitivity to the phenolic effectors of wild-type DmpR and increased the range of molecules detected. The phenol detection characteristics of seven DmpR mutants were demonstrated through their ability to activate transcription of a lacZ reporter gene. Effectors of the DmpR derivatives included phenol, 2-chlorophenol, 2,4-dichlorophenol, 4-chloro-3-methylphenol, 2,4-dimethylphenol, 2-nitrophenol, and 4-nitrophenol.

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Year:  2000        PMID: 10618218      PMCID: PMC91800          DOI: 10.1128/AEM.66.1.163-169.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  26 in total

Review 1.  Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators.

Authors:  J L Ramos; S Marqués; K N Timmis
Journal:  Annu Rev Microbiol       Date:  1997       Impact factor: 15.500

2.  Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150.

Authors:  C C Sze; T Moore; V Shingler
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

3.  Identification of the repressor subdomain within the signal reception module of the prokaryotic enhancer-binding protein XylR of Pseudomonas putida.

Authors:  J Pérez-Martín; V de Lorenzo
Journal:  J Biol Chem       Date:  1996-04-05       Impact factor: 5.157

4.  High efficiency transformation of E. coli by high voltage electroporation.

Authors:  W J Dower; J F Miller; C W Ragsdale
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971

5.  Improved single and multicopy lac-based cloning vectors for protein and operon fusions.

Authors:  R W Simons; F Houman; N Kleckner
Journal:  Gene       Date:  1987       Impact factor: 3.688

6.  Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1: role of the tbuA1 promoter (PtbuA1) in the expression of its cognate activator, TbuT.

Authors:  A M Byrne; R H Olsen
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

7.  Direct regulation of the ATPase activity of the transcriptional activator DmpR by aromatic compounds.

Authors:  V Shingler; H Pavel
Journal:  Mol Microbiol       Date:  1995-08       Impact factor: 3.501

8.  Modulation of the function of the signal receptor domain of XylR, a member of a family of prokaryotic enhancer-like positive regulators.

Authors:  R Salto; A Delgado; C Michán; S Marqués; J L Ramos
Journal:  J Bacteriol       Date:  1998-02       Impact factor: 3.490

9.  A method for constructing single-copy lac fusions in Salmonella typhimurium and its application to the hemA-prfA operon.

Authors:  T Elliott
Journal:  J Bacteriol       Date:  1992-01       Impact factor: 3.490

10.  An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenols.

Authors:  H Pavel; M Forsman; V Shingler
Journal:  J Bacteriol       Date:  1994-12       Impact factor: 3.490

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  16 in total

Review 1.  Where microbiology meets microengineering: design and applications of reporter bacteria.

Authors:  Jan Roelof van der Meer; Shimshon Belkin
Journal:  Nat Rev Microbiol       Date:  2010-07       Impact factor: 60.633

2.  Selection of biocatalysts for chemical synthesis.

Authors:  Stephan van Sint Fiet; Jan B van Beilen; Bernard Witholt
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-30       Impact factor: 11.205

Review 3.  Tailor-made transcriptional biosensors for optimizing microbial cell factories.

Authors:  Brecht De Paepe; Gert Peters; Pieter Coussement; Jo Maertens; Marjan De Mey
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-11       Impact factor: 3.346

Review 4.  Biodegradation of phenol and its derivatives by engineered bacteria: current knowledge and perspectives.

Authors:  Lenka Rucká; Jan Nešvera; Miroslav Pátek
Journal:  World J Microbiol Biotechnol       Date:  2017-09-06       Impact factor: 3.312

5.  Role of the DmpR-mediated regulatory circuit in bacterial biodegradation properties in methylphenol-amended soils.

Authors:  I Sarand; E Skärfstad; M Forsman; M Romantschuk; V Shingler
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

Review 6.  Detection of organic compounds with whole-cell bioluminescent bioassays.

Authors:  Tingting Xu; Dan Close; Abby Smartt; Steven Ripp; Gary Sayler
Journal:  Adv Biochem Eng Biotechnol       Date:  2014       Impact factor: 2.635

7.  Engineering an allosteric transcription factor to respond to new ligands.

Authors:  Noah D Taylor; Alexander S Garruss; Rocco Moretti; Sum Chan; Mark A Arbing; Duilio Cascio; Jameson K Rogers; Farren J Isaacs; Sriram Kosuri; David Baker; Stanley Fields; George M Church; Srivatsan Raman
Journal:  Nat Methods       Date:  2015-12-21       Impact factor: 28.547

8.  An effective strategy for a whole-cell biosensor based on putative effector interaction site of the regulatory DmpR protein.

Authors:  Saurabh Gupta; Mritunjay Saxena; Neeru Saini; Rita Kumar; Anil Kumar
Journal:  PLoS One       Date:  2012-08-24       Impact factor: 3.240

Review 9.  Bacterial Biosensors for Measuring Availability of Environmental Pollutants.

Authors:  Robin Tecon; Jan Roelof Van der Meer
Journal:  Sensors (Basel)       Date:  2008-07-10       Impact factor: 3.576

Review 10.  Microbial biosensors: engineered microorganisms as the sensing machinery.

Authors:  Miso Park; Shen-Long Tsai; Wilfred Chen
Journal:  Sensors (Basel)       Date:  2013-05-06       Impact factor: 3.576

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