Literature DB >> 10612825

Use of molecular variation in the NCBI dbSNP database.

S T Sherry1, M Ward, K Sirotkin.   

Abstract

While high quality information regarding variation in genes is currently available in locus-specific or specialized mutation databases, the need remains for a general catalog of genome variation to address the large-scale sampling designs required by association studies, gene mapping, and evolutionary biology. In response to this need, the National Center for Biotechnology Information (NCBI) has established the dbSNP database http://ncbi. nlm.nih.gov/SNP/ to serve as a generalized, central variation database. Submissions to dbSNP will be integrated with other sources of information at NCBI such as GenBank, PubMed, LocusLink, and the Human Genome Project data, and the complete contents of dbSNP are available to the public via anonymous FTP. Hum Mutat 15:68-75, 2000. Published 2000 Wiley-Liss, Inc.

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Year:  2000        PMID: 10612825     DOI: 10.1002/(SICI)1098-1004(200001)15:1<68::AID-HUMU14>3.0.CO;2-6

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  19 in total

1.  Shifting paradigm of association studies: value of rare single-nucleotide polymorphisms.

Authors:  Ivan P Gorlov; Olga Y Gorlova; Shamil R Sunyaev; Margaret R Spitz; Christopher I Amos
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2.  Somatic MAP2K1 Mutations Are Associated with Extracranial Arteriovenous Malformation.

Authors:  Javier A Couto; August Y Huang; Dennis J Konczyk; Jeremy A Goss; Steven J Fishman; John B Mulliken; Matthew L Warman; Arin K Greene
Journal:  Am J Hum Genet       Date:  2017-02-09       Impact factor: 11.025

3.  Re-identification of DNA through an automated linkage process.

Authors:  B Malin; L Sweeney
Journal:  Proc AMIA Symp       Date:  2001

4.  Endothelial MAP2K1 mutations in arteriovenous malformation activate the RAS/MAPK pathway.

Authors:  Patrick J Smits; Dennis J Konczyk; Christopher L Sudduth; Jeremy A Goss; Arin K Greene
Journal:  Biochem Biophys Res Commun       Date:  2020-07-01       Impact factor: 3.575

5.  Reading between the LINEs: human genomic variation induced by LINE-1 retrotransposition.

Authors:  F M Sheen; S T Sherry; G M Risch; M Robichaux; I Nasidze; M Stoneking; M A Batzer; G D Swergold
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

6.  Human diallelic insertion/deletion polymorphisms.

Authors:  James L Weber; Donna David; Jeremy Heil; Ying Fan; Chengfeng Zhao; Gabor Marth
Journal:  Am J Hum Genet       Date:  2002-09-04       Impact factor: 11.025

7.  BTNL2 gene polymorphisms may be associated with susceptibility to Kawasaki disease and formation of coronary artery lesions in Taiwanese children.

Authors:  Kai-Chung Hsueh; Ying-Ju Lin; Jeng-Sheng Chang; Lei Wan; Fuu-Jen Tsai
Journal:  Eur J Pediatr       Date:  2009-11-01       Impact factor: 3.183

8.  ELMOD3, a novel causative gene, associated with human autosomal dominant nonsyndromic and progressive hearing loss.

Authors:  Wu Li; Jie Sun; Jie Ling; Jiada Li; Chufeng He; Yalan Liu; Hongsheng Chen; Meichao Men; Zhijie Niu; Yuyuan Deng; Meng Li; Taoxi Li; Jie Wen; Shushan Sang; Haibo Li; Zhengqing Wan; Elodie M Richard; Prem Chapagain; Denise Yan; Xue Zhong Liu; Lingyun Mei; Yong Feng
Journal:  Hum Genet       Date:  2018-04-30       Impact factor: 4.132

9.  Genetic polymorphisms in DPF3 associated with risk of breast cancer and lymph node metastases.

Authors:  Carolyn R Hoyal; Stefan Kammerer; Richard B Roth; Richard Reneland; George Marnellos; Marion Kiechle; Ulrike Schwarz-Boeger; Lyn R Griffiths; Florian Ebner; Joachim Rehbock; Matthew R Nelson; Andreas Braun
Journal:  J Carcinog       Date:  2005-08-19

10.  A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays.

Authors:  Philippe Lamy; Claus L Andersen; Lars Dyrskjot; Niels Torring; Carsten Wiuf
Journal:  BMC Bioinformatics       Date:  2007-11-09       Impact factor: 3.169

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