Literature DB >> 10612319

Identification of a W variant outbreak of Mycobacterium tuberculosis via population-based molecular epidemiology.

P J Bifani1, B Mathema, Z Liu, S L Moghazeh, B Shopsin, B Tempalski, J Driscol, R Frothingham, J M Musser, P Alcabes, B N Kreiswirth.   

Abstract

CONTEXT: Typing of Mycobacterium tuberculosis could provide a more sensitive means of identifying outbreaks than use of conventional surveillance techniques alone. Variants of the New York City W strain of M tuberculosis were identified in New Jersey.
OBJECTIVE: To describe the spread of the W family of M tuberculosis strains in New Jersey identified by molecular typing and surveillance data.
DESIGN: Population-based cross-sectional study. SETTING AND
SUBJECTS: All incident culture-positive tuberculosis cases reported in New Jersey from January 1996 to September 1998, for which the W family was defined by insertion sequence (IS) IS6110 DNA fingerprinting, polymorphic GC-rich repetitive sequence (PGRS) typing, spacer oligotyping (spoligotyping), and variable number tandem repeat (VNTR) analysis. MAIN OUTCOME MEASURE: Identification and characterization of W family clones supplemented by surveillance data.
RESULTS: Isolates from 1207 cases were analyzed, of which 68 isolates (6%) belonged to the W family based on IS6110 and spoligotype hybridization patterns. The IS6110 hybridization patterns or fingerprints revealed that43 patients (designated group A) shared a unique banding motif not present in other W family isolates. Strains collected from the remaining 25 patients (designated group B), while related to W, displayed a variety of IS6110 patterns and did not share this motif. The PGRS and VNTR typing confirmed the division of the W family into groups A and B and again showed group A strains to be closely related and group B strains to be more diverse. The demographic characteristics of individuals from groups A and B were specific and defined. Group A patients were more likely than group B patients to be US born (91 % vs 24%, P<.001), black (76% vs 16%, P<.001), human immunodeficiency virus positive (40% vs 0%, P = .007), and residents of urban northeast New Jersey counties (P<.001). Patients with group B strains were primarily non-US born, of Asian descent, and more dispersed throughout New Jersey. No outbreak had been detected using conventional surveillance alone.
CONCLUSIONS: The implementation of multiple molecular techniques in conjunction with surveillance data enabled us to identify a previously undetected outbreak in a defined geographical setting. The outbreak isolates comprise members of a distinct branch of the W family phylogenetic lineage. The use of molecular strain typing provides a proactive approach that may be used to initiate, and not just augment, traditional surveillance outbreak investigations.

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Year:  1999        PMID: 10612319     DOI: 10.1001/jama.282.24.2321

Source DB:  PubMed          Journal:  JAMA        ISSN: 0098-7484            Impact factor:   56.272


  69 in total

Review 1.  The nature and consequence of genetic variability within Mycobacterium tuberculosis.

Authors:  M Kato-Maeda; P J Bifani; B N Kreiswirth; P M Small
Journal:  J Clin Invest       Date:  2001-03       Impact factor: 14.808

2.  Novel IS6110 insertion sites in the direct repeat locus of Mycobacterium tuberculosis clinical strains from the St. Petersburg area of Russia and evolutionary and epidemiological considerations.

Authors:  Igor Mokrousov; Olga Narvskaya; Elena Limeschenko; Tatiana Otten; Boris Vyshnevskiy
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

3.  Discrimination of single-copy IS6110 DNA fingerprints of Mycobacterium tuberculosis isolates by high-resolution minisatellite-based typing.

Authors:  Ann S G Lee; Lynn L H Tang; Irene H K Lim; Richard Bellamy; Sin-Yew Wong
Journal:  J Clin Microbiol       Date:  2002-02       Impact factor: 5.948

4.  Spoligotyping of Mycobacterium tuberculosis isolates from multiple-drug-resistant tuberculosis patients from Bombay, India.

Authors:  Nerges F Mistry; Anand M Iyer; Desirée T B D'souza; G Michael Taylor; Douglas B Young; Noshir H Antia
Journal:  J Clin Microbiol       Date:  2002-07       Impact factor: 5.948

5.  PCR-based methodology for detecting multidrug-resistant strains of Mycobacterium tuberculosis Beijing family circulating in Russia.

Authors:  I Mokrousov; T Otten; A Vyazovaya; E Limeschenko; M L Filipenko; C Sola; N Rastogi; L Steklova; B Vyshnevskiy; O Narvskaya
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2003-06-03       Impact factor: 3.267

6.  Differential monocyte activation underlies strain-specific Mycobacterium tuberculosis pathogenesis.

Authors:  Claudia Manca; Michael B Reed; Sherry Freeman; Barun Mathema; Barry Kreiswirth; Clifton E Barry; Gilla Kaplan
Journal:  Infect Immun       Date:  2004-09       Impact factor: 3.441

7.  Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains.

Authors:  Anthony G Tsolaki; Aaron E Hirsh; Kathryn DeRiemer; Jose Antonio Enciso; Melissa Z Wong; Margaret Hannan; Yves-Olivier L Goguet de la Salmoniere; Kumiko Aman; Midori Kato-Maeda; Peter M Small
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-15       Impact factor: 11.205

8.  Expanded geographical distribution of the N family of Mycobacterium tuberculosis strains within the United States.

Authors:  S Joy Milan; Kirsten A Hauge; Natalia E Kurepina; Kathryn H Lofy; Stefan V Goldberg; Masahiro Narita; Charles M Nolan; Peter D McElroy; Barry N Kreiswirth; Gerard A Cangelosi
Journal:  J Clin Microbiol       Date:  2004-03       Impact factor: 5.948

9.  Molecular epidemiology of HIV-associated tuberculosis in Dar es Salaam, Tanzania: strain predominance, clustering, and polyclonal disease.

Authors:  Lisa V Adams; Barry N Kreiswirth; Robert D Arbeit; Hanna Soini; Lillian Mtei; Mecky Matee; Muhammad Bakari; Timothy Lahey; Wendy Wieland-Alter; Elena Shashkina; Natalia Kurepina; Jeffrey R Driscoll; Kisali Pallangyo; C Robert Horsburgh; C Fordham von Reyn
Journal:  J Clin Microbiol       Date:  2012-05-30       Impact factor: 5.948

10.  A novel method of identifying Mycobacterium tuberculosis Beijing strains by detecting SNPs in Rv0444c and Rv2629.

Authors:  Lu Zhang; Wenxi Xu; Zhenling Cui; Yanyan Liu; Wenjie Wang; Jie Wang; Ding Hu; Dingqian Liu; Honghai Wang
Journal:  Curr Microbiol       Date:  2013-11-12       Impact factor: 2.188

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