Literature DB >> 10601654

The gene distribution in the genomes of pea, tomato and date palm.

A Barakat1, D T Han, A Benslimane, A Rode, G Bernardi.   

Abstract

The vast majority of genes of maize, rice, barley and wheat are contained in long gene-rich regions (collectively called the 'gene space') separated by long gene-empty regions. The gene space covers a narrow, 0.8-1.6%, GC range, possibly because of the presence of abundant transposons. Here we report that the gene space is not an exclusive property of Gramineae, because it also exists in the large genome of pea (5000 Mb). Moreover, the gene space is not just dependent upon genome size, since a gene space is found in rice (415 Mb), but not in Arabidopsis (120 Mb), nor in two other plants investigated in the present work, date palm (250 Mb) and tomato (1000 Mb).

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Year:  1999        PMID: 10601654     DOI: 10.1016/s0014-5793(99)01587-2

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  6 in total

1.  Identification and physical localization of useful genes and markers to a major gene-rich region on wheat group 1S chromosomes.

Authors:  D Sandhu; J A Champoux; S N Bondareva; K S Gill
Journal:  Genetics       Date:  2001-04       Impact factor: 4.562

2.  Demarcating the gene-rich regions of the wheat genome.

Authors:  Mustafa Erayman; Devinder Sandhu; Deepak Sidhu; Muharrem Dilbirligi; P S Baenziger; Kulvinder S Gill
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971

3.  Anchoring of a large set of markers onto a BAC library for the development of a draft physical map of the grapevine genome.

Authors:  Didier Lamoureux; Anne Bernole; Isabelle Le Clainche; Sarah Tual; Vincent Thareau; Sophie Paillard; Fabrice Legeai; Carole Dossat; Patrick Wincker; Marilyn Oswald; Didier Merdinoglu; Céline Vignault; Serge Delrot; Michel Caboche; Boulos Chalhoub; Anne-Françoise Adam-Blondon
Journal:  Theor Appl Genet       Date:  2006-05-18       Impact factor: 5.699

4.  Current awareness.

Authors:  R Drysdale; L Bayraktaroglu
Journal:  Yeast       Date:  2000-06-30       Impact factor: 3.239

5.  Large-scale SNP discovery through RNA sequencing and SNP genotyping by targeted enrichment sequencing in cassava (Manihot esculenta Crantz).

Authors:  Wirulda Pootakham; Jeremy R Shearman; Panthita Ruang-Areerate; Chutima Sonthirod; Duangjai Sangsrakru; Nukoon Jomchai; Thippawan Yoocha; Kanokporn Triwitayakorn; Somvong Tragoonrung; Sithichoke Tangphatsornruang
Journal:  PLoS One       Date:  2014-12-31       Impact factor: 3.240

Review 6.  Recent advances in date palm genomics: A comprehensive review.

Authors:  Hifzur Rahman; Prashant Vikram; Zied Hammami; Rakesh Kumar Singh
Journal:  Front Genet       Date:  2022-09-13       Impact factor: 4.772

  6 in total

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