Literature DB >> 10597483

Analysis of complex traits using neural networks.

A Bhat1, P R Lucek, J Ott.   

Abstract

A recently developed approach that employs artificial neural networks (ANNs) was applied to the simulated data set to identify sets of marker loci involved in disease etiology. In this implementation, ANNs are trained to predict the disease state (output) from the given genetic marker data (input). A contribution value (CV) for each locus is calculated from the weights that represent the strength of the connections for the trained ANN; a higher CV indicates a higher probability of linkage. The highest CV values were chosen as the most likely candidate regions involved in the disease.

Mesh:

Year:  1999        PMID: 10597483     DOI: 10.1002/gepi.1370170781

Source DB:  PubMed          Journal:  Genet Epidemiol        ISSN: 0741-0395            Impact factor:   2.135


  6 in total

1.  Generalized T2 test for genome association studies.

Authors:  Momiao Xiong; Jinying Zhao; Eric Boerwinkle
Journal:  Am J Hum Genet       Date:  2002-03-29       Impact factor: 11.025

2.  Novel analytical methods applied to type 1 diabetes genome-scan data.

Authors:  Flemming Pociot; Allan E Karlsen; Claus B Pedersen; Mogens Aalund; Jørn Nerup
Journal:  Am J Hum Genet       Date:  2004-03-11       Impact factor: 11.025

3.  Machine learning for detecting gene-gene interactions: a review.

Authors:  Brett A McKinney; David M Reif; Marylyn D Ritchie; Jason H Moore
Journal:  Appl Bioinformatics       Date:  2006

4.  An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions.

Authors:  David J Miller; Yanxin Zhang; Guoqiang Yu; Yongmei Liu; Li Chen; Carl D Langefeld; David Herrington; Yue Wang
Journal:  Bioinformatics       Date:  2009-07-16       Impact factor: 6.937

5.  Optimization of neural network architecture using genetic programming improves detection and modeling of gene-gene interactions in studies of human diseases.

Authors:  Marylyn D Ritchie; Bill C White; Joel S Parker; Lance W Hahn; Jason H Moore
Journal:  BMC Bioinformatics       Date:  2003-07-07       Impact factor: 3.169

6.  Neural networks for genetic epidemiology: past, present, and future.

Authors:  Marylyn D Ritchie; Alison A Motsinger-Reif
Journal:  BioData Min       Date:  2008-07-17       Impact factor: 2.522

  6 in total

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