Literature DB >> 10594239

A novel pleckstrin homology-related gene family defined by Ipl/Tssc3, TDAG51, and Tih1: tissue-specific expression, chromosomal location, and parental imprinting.

D Frank1, C L Mendelsohn, E Ciccone, K Svensson, R Ohlsson, B Tycko.   

Abstract

We previously described a gene, Ipl (Tssc3), that is expressed selectively from the maternal allele in placenta, yolk sac, and fetal liver and that maps within the imprinted domain of mouse distal Chromosome (Chr) 7/human Chr 11p15.5 (Hum Mol Genet 6, 2021, 1997). Ipl is similar to TDAG51, a gene that is involved in FAS/CD95 expression. Here we describe another gene, Tih1 (TDAG/Ipl homologue 1), with equivalent sequence similarity to Ipl. Structural prediction indicates that the products of these three genes share a central motif resembling a pleckstrin-homology (PH) domain, and TIH1 protein has weak sequence similarity to the PH-domain protein SEC7/CYTOHESIN. Like Ipl, Tih1 is a small gene with a single small intron. Tih1 maps to distal mouse Chr 1 and human Chr 1q31, chromosomal regions that have not shown evidence for imprinting and, in contrast to Ipl, Tih1 is expressed equally from both parental alleles. Ipl, Tih1, and TDAG51 have overlapping but distinct patterns of expression. Tih1 and TDAG51 are expressed in multiple fetal and adult tissues. In contrast, during early mouse development Ipl mRNA and protein are highly specific for two tissues involved in maternal/fetal exchange: visceral endoderm of the yolk sac and labyrinthine trophoblast of the placenta. These findings highlight the dominance of chromosomal context over gene structure in some examples of parental imprinting and extend previous evidence for placenta-specific expression of imprinted genes. The data also define a new subfamily of PH domain genes.

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Year:  1999        PMID: 10594239     DOI: 10.1007/s003359901182

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  34 in total

1.  TDAG51 is not essential for Fas/CD95 regulation and apoptosis in vivo.

Authors:  J Rho; S Gong; N Kim; Y Choi
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

Review 2.  The placental imprintome and imprinted gene function in the trophoblast glycogen cell lineage.

Authors:  Louis Lefebvre
Journal:  Reprod Biomed Online       Date:  2012-04-04       Impact factor: 3.828

3.  Partial loss of Ascl2 function affects all three layers of the mature placenta and causes intrauterine growth restriction.

Authors:  Rosemary Oh-McGinnis; Aaron B Bogutz; Louis Lefebvre
Journal:  Dev Biol       Date:  2011-01-14       Impact factor: 3.582

4.  The imprinted Phlda2 gene regulates extraembryonic energy stores.

Authors:  S J Tunster; B Tycko; R M John
Journal:  Mol Cell Biol       Date:  2010-01       Impact factor: 4.272

5.  Hypoxia influences expression profile of Pleckstrin homology-like domain, family A, member 2 in Indian catfish, Clarias batrachus (Linnaeus, 1758): a new candidate gene for hypoxia tolerance in fish.

Authors:  Vindhya Mohindra; Ratnesh K Tripathi; Prabhaker Yadav; Rajeev K Singh; Kuldeep K Lal
Journal:  J Biosci       Date:  2014-06       Impact factor: 1.826

6.  Placental overgrowth in mice lacking the imprinted gene Ipl.

Authors:  Dale Frank; Weiwei Fortino; Lorraine Clark; Raymond Musalo; Wenxian Wang; Anjana Saxena; Chi-Ming Li; Wolf Reik; Thomas Ludwig; Benjamin Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

7.  A novel HSF1-mediated death pathway that is suppressed by heat shock proteins.

Authors:  Naoki Hayashida; Sachiye Inouye; Mitsuaki Fujimoto; Yasunori Tanaka; Hanae Izu; Eiichi Takaki; Hitoshi Ichikawa; Jaerang Rho; Akira Nakai
Journal:  EMBO J       Date:  2006-10-05       Impact factor: 11.598

8.  Microarray analysis of prothrombin knockdown in zebrafish.

Authors:  Kenneth R Day; Pudur Jagadeeswaran
Journal:  Blood Cells Mol Dis       Date:  2009-05-13       Impact factor: 3.039

9.  Pleckstrin homology-like domain, family A, member 1 (PHLDA1) and cancer.

Authors:  Maria Aparecida Nagai
Journal:  Biomed Rep       Date:  2016-01-25

Review 10.  The function of non-coding RNAs in genomic imprinting.

Authors:  Martha V Koerner; Florian M Pauler; Ru Huang; Denise P Barlow
Journal:  Development       Date:  2009-06       Impact factor: 6.868

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