Literature DB >> 10591207

Synexpression groups in eukaryotes.

C Niehrs1, N Pollet.   

Abstract

In 1960, Jacob and Monod described the bacterial operon, a cluster of functionally interacting genes whose expression is tightly coordinated. Global expression analysis has shown that the highly coordinate expression of genes functioning in common processes is also a widespread phenomenon in eukaryotes. These sets of co-regulated genes, or 'synexpression groups', show a striking parallel to the operon, and may be a key determinant facilitating evolutionary change leading to animal diversity.

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Year:  1999        PMID: 10591207     DOI: 10.1038/990025

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  123 in total

Review 1.  The establishment of Spemann's organizer and patterning of the vertebrate embryo.

Authors:  E M De Robertis; J Larraín; M Oelgeschläger; O Wessely
Journal:  Nat Rev Genet       Date:  2000-12       Impact factor: 53.242

2.  'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns.

Authors:  T Hastie; R Tibshirani; M B Eisen; A Alizadeh; R Levy; L Staudt; W C Chan; D Botstein; P Brown
Journal:  Genome Biol       Date:  2000-08-04       Impact factor: 13.583

Review 3.  The Spemann organizer and embryonic head induction.

Authors:  C Niehrs
Journal:  EMBO J       Date:  2001-02-15       Impact factor: 11.598

4.  Developmental control of stress stimulons in Streptomyces coelicolor revealed by statistical analyses of global gene expression patterns.

Authors:  J Vohradsky; X M Li; G Dale; M Folcher; L Nguyen; P H Viollier; C J Thompson
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

5.  The mitochondrial genome of the stramenopile alga Chrysodidymus synuroideus. Complete sequence, gene content and genome organization.

Authors:  J M Chesnick; M Goff; J Graham; C Ocampo; B F Lang; E Seif; G Burger
Journal:  Nucleic Acids Res       Date:  2000-07-01       Impact factor: 16.971

6.  Nrarp is a novel intracellular component of the Notch signaling pathway.

Authors:  E Lamar; G Deblandre; D Wettstein; V Gawantka; N Pollet; C Niehrs; C Kintner
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

7.  Negative feedback in the bone morphogenetic protein 4 (BMP4) synexpression group governs its dynamic signaling range and canalizes development.

Authors:  Malte Paulsen; Stefan Legewie; Roland Eils; Emil Karaulanov; Christof Niehrs
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-01       Impact factor: 11.205

8.  yMGV: a database for visualization and data mining of published genome-wide yeast expression data.

Authors:  P Marc; F Devaux; C Jacq
Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

9.  Toward a functional annotation of the human genome using artificial transcription factors.

Authors:  Dong-ki Lee; Jin Woo Park; Youn-Jae Kim; Jiwon Kim; Yangsoon Lee; Jeonglim Kim; Jin-Soo Kim
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

10.  Patterns of gene expression: homology or homocracy?

Authors:  Claus Nielsen; Pedro Martinez
Journal:  Dev Genes Evol       Date:  2003-02-18       Impact factor: 0.900

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