Literature DB >> 10588890

Stitching together RNA tertiary architectures.

T Hermann1, D J Patel.   

Abstract

The powerful explanatory paradigm of molecular biology requiring form to co-evolve with function has again been proven successful when, over the recent two decades, a wealth of biological functions have been uncovered for RNA. Previously considered as a mere mediator of the genetic code, RNA is now acknowledged as a key player in a wide variety of cellular processes. Along with the discovery of novel biological functions of RNA molecules, a number of RNA three-dimensional structures have been solved which beautifully demonstrate the molecular adaptability which allows RNA to participate as a key player in these functions. A distinct repertoire of molecular motifs provides a basis for the assembly of complex RNA tertiary architectures. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10588890     DOI: 10.1006/jmbi.1999.3312

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  55 in total

1.  NCIR: a database of non-canonical interactions in known RNA structures.

Authors:  Uma Nagaswamy; Maia Larios-Sanz; James Hury; Shakaala Collins; Zhengdong Zhang; Qin Zhao; George E Fox
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  SCOR: a Structural Classification of RNA database.

Authors:  Peter S Klosterman; Makio Tamura; Stephen R Holbrook; Steven E Brenner
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

3.  Geometric nomenclature and classification of RNA base pairs.

Authors:  N B Leontis; E Westhof
Journal:  RNA       Date:  2001-04       Impact factor: 4.942

4.  In vitro characterization of a base pairing interaction between the primer binding site and the minimal packaging signal of avian leukosis virus genomic RNA.

Authors:  Igor Kanevsky; Natalya Vasilenko; Hélène Dumay-Odelot; Philippe Fossé
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

5.  The Drosophila hairy RNA localization signal modulates the kinetics of cytoplasmic mRNA transport.

Authors:  Simon L Bullock; Daniel Zicha; David Ish-Horowicz
Journal:  EMBO J       Date:  2003-05-15       Impact factor: 11.598

6.  Exploring the repertoire of RNA secondary motifs using graph theory; implications for RNA design.

Authors:  Hin Hark Gan; Samuela Pasquali; Tamar Schlick
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

7.  Non-Watson-Crick basepairing and hydration in RNA motifs: molecular dynamics of 5S rRNA loop E.

Authors:  Kamila Réblová; Nad'a Spacková; Richard Stefl; Kristina Csaszar; Jaroslav Koca; Neocles B Leontis; Jirí Sponer
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

8.  On the occurrence of the T-loop RNA folding motif in large RNA molecules.

Authors:  Andrey S Krasilnikov; Alfonso Mondragón
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

9.  The functional anatomy of an intrinsic transcription terminator.

Authors:  Annie Schwartz; A Rachid Rahmouni; Marc Boudvillain
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

10.  Crystal structure of NF-kappaB (p50)2 complexed to a high-affinity RNA aptamer.

Authors:  De-Bin Huang; Don Vu; Laura A Cassiday; Jeff M Zimmerman; L James Maher; Gourisankar Ghosh
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-28       Impact factor: 11.205

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