Literature DB >> 10585477

Identification of a U8 snoRNA-specific binding protein.

N Tomasevic1, B Peculis.   

Abstract

Eukaryotic nucleoli contain a large and diverse population of small nucleolar ribonucleoprotein particles (snoRNPs) that play diverse and essential roles in ribosome biogenesis. We previously demonstrated that U8 snoRNP is essential for processing of both 5.8 and 28 S rRNA. The RNA component of the U8 RNP particle is necessary but not sufficient for processing. Using an electrophoretic mobility sift assay, we enriched for U8-specific binding proteins from Xenopus ovary extracts. UV cross-linking reactions with partially purified fractions implicated a 29-kDa protein directly binding to U8 RNA. This protein interacted specifically and with high affinity with U8 snoRNA; it did not bind other snoRNAs and is probably not a common component of all snoRNPs. This is the first report of a protein component specific to an snoRNP essential for processing of the large ribosomal subunit in vertebrates.

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Year:  1999        PMID: 10585477     DOI: 10.1074/jbc.274.50.35914

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

Review 1.  Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.

Authors:  Michael P Terns; Rebecca M Terns
Journal:  Gene Expr       Date:  2002

2.  Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence.

Authors:  Nenad Tomasevic; Brenda A Peculis
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

3.  Prediction of RNA-binding proteins from primary sequence by a support vector machine approach.

Authors:  Lian Yi Han; Cong Zhong Cai; Siew Lin Lo; Maxey C M Chung; Yu Zong Chen
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

4.  Multiple mRNA decapping enzymes in mammalian cells.

Authors:  Man-Gen Song; You Li; Megerditch Kiledjian
Journal:  Mol Cell       Date:  2010-11-12       Impact factor: 17.970

5.  Decapper comes into focus.

Authors:  Vincent Shen; Megerditch Kiledjian
Journal:  Structure       Date:  2006-02       Impact factor: 5.006

6.  The stable 2-kilobase latency-associated transcript of herpes simplex virus type 1 can alter the assembly of the 60S ribosomal subunit and is exported from nucleus to cytoplasm by a CRM1-dependent pathway.

Authors:  Doina Atanasiu; Nigel W Fraser
Journal:  J Virol       Date:  2007-05-09       Impact factor: 5.103

7.  Differential utilization of decapping enzymes in mammalian mRNA decay pathways.

Authors:  You Li; Mangen Song; Megerditch Kiledjian
Journal:  RNA       Date:  2011-01-11       Impact factor: 4.942

8.  Multiple Nudix family proteins possess mRNA decapping activity.

Authors:  Man-Gen Song; Sophie Bail; Megerditch Kiledjian
Journal:  RNA       Date:  2013-01-25       Impact factor: 4.942

9.  Transcript-specific decapping and regulated stability by the human Dcp2 decapping protein.

Authors:  You Li; Man-Gen Song; Megerditch Kiledjian
Journal:  Mol Cell Biol       Date:  2007-11-26       Impact factor: 4.272

10.  Mutational analysis of a Dcp2-binding element reveals general enhancement of decapping by 5'-end stem-loop structures.

Authors:  You Li; Eric S Ho; Samuel I Gunderson; Megerditch Kiledjian
Journal:  Nucleic Acids Res       Date:  2009-02-20       Impact factor: 16.971

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