Literature DB >> 10583920

Reverse-transcription polymerase chain reaction detection of the enteroviruses.

J R Romero1.   

Abstract

OBJECTIVE: This review focuses on commercial and in-house-developed reverse-transcription polymerase chain reaction (RT-PCR) assays used for the detection of enteroviral infections. In addition to providing details on the performance of RT-PCR, its specificity, and sensitivity, the clinical utility of this diagnostic method with specific reference to its impact on hospitalization and cost savings is addressed. DATA SOURCES: MEDLINE was searched for reports relating to RT-PCR detection of the enteroviruses in adults and children. The search was restricted to studies reported in English language journals. STUDY SELECTION: Reports documenting detailed information regarding the RT-PCR conditions, primers, sensitivity, specificity and, if relevant, clinical impact were selected for analysis. DATA EXTRACTION: Details regarding method of extraction of the enteroviral genome, the primers used, RT-PCR conditions, and sensitivity and specificity of the assay were extracted from the literature. For reports detailing the use of RT-PCR in the clinical management of enteroviral infections in children, the reduction in duration of hospitalization and health care cost savings were recorded. DATA SYNTHESIS: Reverse-transcription PCR can increase the yield of detection of enteroviruses from cerebrospinal fluid by a mean of approximately 20% over tissue culture. Reverse-transcription PCR of cerebrospinal fluid has been shown to exhibit sensitivity and specificity values of 86% to 100% and 92% to 100%, respectively. Reductions of 1 to 3 days of hospitalization per patient are predicted if RT-PCR is used to diagnose enteroviral meningitis in children.
CONCLUSIONS: Reverse-transcription PCR detection of enteroviral infections is an extremely rapid, sensitive, and specific diagnostic modality. Both commercial assays and assays developed in-house appear to be equivalent with regard to sensitivity and specificity. Reverse-transcription PCR diagnosis of enteroviral infections in children could reduce the length of hospitalization and result in significant health care cost savings.

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Year:  1999        PMID: 10583920     DOI: 10.5858/1999-123-1161-RTPCRD

Source DB:  PubMed          Journal:  Arch Pathol Lab Med        ISSN: 0003-9985            Impact factor:   5.534


  33 in total

1.  Rapid detection of enterovirus RNA in cerebrospinal fluid specimens with a novel single-tube real-time reverse transcription-PCR assay.

Authors:  W A Verstrepen; S Kuhn; M M Kockx; M E Van De Vyvere; A H Mertens
Journal:  J Clin Microbiol       Date:  2001-11       Impact factor: 5.948

2.  Comparison of the NucliSens Basic kit (Nucleic Acid Sequence-Based Amplification) and the Argene Biosoft Enterovirus Consensus Reverse Transcription-PCR assays for rapid detection of enterovirus RNA in clinical specimens.

Authors:  Marie L Landry; Robin Garner; David Ferguson
Journal:  J Clin Microbiol       Date:  2003-11       Impact factor: 5.948

3.  Rapid enterovirus RNA detection in clinical specimens by using nucleic acid sequence-based amplification.

Authors:  Marie L Landry; Robin Garner; David Ferguson
Journal:  J Clin Microbiol       Date:  2003-01       Impact factor: 5.948

4.  Comparison of automated and manual nucleic acid extraction methods for detection of enterovirus RNA.

Authors:  Julia H Knepp; Melissa A Geahr; Michael S Forman; Alexandra Valsamakis
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

5.  Rapid one-step quantitative reverse transcriptase PCR assay with competitive internal positive control for detection of enteroviruses in environmental samples.

Authors:  Jason B Gregory; R Wayne Litaker; Rachel T Noble
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

6.  Quantitative PCR-enhanced immunoassay for measurement of enteroviral immunoglobulin M antibody and diagnosis of aseptic meningitis.

Authors:  Amal Elfaitouri; Nahla Mohamed; Jan Fohlman; Robert Aspholm; Gun Frisk; Göran Friman; Lars Magnius; Jonas Blomberg
Journal:  Clin Diagn Lab Immunol       Date:  2005-02

7.  Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens.

Authors:  W Allan Nix; M Steven Oberste; Mark A Pallansch
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

8.  Acute febrile illness surveillance in a tertiary hospital emergency department: comparison of influenza and dengue virus infections.

Authors:  Olga D Lorenzi; Christopher J Gregory; Luis Manuel Santiago; Héctor Acosta; Ivonne E Galarza; Elizabeth Hunsperger; Jorge Muñoz; Duy M Bui; M Steven Oberste; Silvia Peñaranda; Carlos García-Gubern; Kay M Tomashek
Journal:  Am J Trop Med Hyg       Date:  2013-02-04       Impact factor: 2.345

Review 9.  Molecular methods for diagnosis of viral encephalitis.

Authors:  Roberta L Debiasi; Kenneth L Tyler
Journal:  Clin Microbiol Rev       Date:  2004-10       Impact factor: 26.132

Review 10.  Detection of respiratory viruses by molecular methods.

Authors:  James B Mahony
Journal:  Clin Microbiol Rev       Date:  2008-10       Impact factor: 26.132

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