Literature DB >> 10582277

A radiation hybrid map of bovine chromosome one.

C E Rexroad1, J S Schlapfer, Y Yang, B Harlizius, J E Womack.   

Abstract

Radiation hybrid (RH) mapping has proven to be an extremely powerful approach to constructing high density maps of human chromosomes and is experiencing increased use in other animals, including cattle. A 5000 rad bovine whole-genome radiation hybrid panel was recently constructed in order to integrate existing cattle linkage maps with evolutionarily conserved genes and provide high resolution comparative maps relative to humans and mice. We utilized this panel to construct a 19 marker framework map of bovine chromosome 1 (BTA1), which included 8 Type I loci and 11 Type II loci ordered with at least 1000:1 odds. A 35 marker comprehensive map including 15 Type I loci and 20 Type II loci was also produced. Of the 15 Type I loci ordered on the comprehensive map, three are ordered on HSA3 and five are ordered in three blocks on HSA21 on the human cytogenetic maps.

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Year:  1999        PMID: 10582277     DOI: 10.1046/j.1365-2052.1999.00504.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  10 in total

1.  A missense mutation in the bovine SLC35A3 gene, encoding a UDP-N-acetylglucosamine transporter, causes complex vertebral malformation.

Authors:  Bo Thomsen; Per Horn; Frank Panitz; Emøke Bendixen; Anette H Petersen; Lars-Erik Holm; Vivi H Nielsen; Jørgen S Agerholm; Jens Arnbjerg; Christian Bendixen
Journal:  Genome Res       Date:  2005-12-12       Impact factor: 9.043

2.  An ordered comparative map of the cattle and human genomes.

Authors:  M R Band; J H Larson; M Rebeiz; C A Green; D W Heyen; J Donovan; R Windish; C Steining; P Mahyuddin; J E Womack; H A Lewin
Journal:  Genome Res       Date:  2000-09       Impact factor: 9.043

3.  A comparative radiation hybrid map of bovine chromosome 18 and homologous chromosomes in human and mice.

Authors:  Tom Goldammer; Srinivas R Kata; Ronald M Brunner; Ute Dorroch; Hanka Sanftleben; Manfred Schwerin; James E Womack
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

4.  A second generation radiation hybrid map to aid the assembly of the bovine genome sequence.

Authors:  Oliver C Jann; Jan Aerts; Michelle Jones; Nicola Hastings; Andy Law; Stephanie McKay; Elisa Marques; Aparna Prasad; Jody Yu; Stephen S Moore; Sandrine Floriot; Marie-Françoise Mahé; André Eggen; Licia Silveri; Riccardo Negrini; Elisabetta Milanesi; Paolo Ajmone-Marsan; Alessio Valentini; Cinzia Marchitelli; Maria C Savarese; Michal Janitz; Ralf Herwig; Steffen Hennig; Chiara Gorni; Erin E Connor; Tad S Sonstegard; Timothy Smith; Cord Drögemüller; John L Williams
Journal:  BMC Genomics       Date:  2006-11-06       Impact factor: 3.969

Review 5.  A Review of Selected Genes with Known Effects on Performance and Health of Cattle.

Authors:  Eduardo Casas; Marcus E Kehrli
Journal:  Front Vet Sci       Date:  2016-12-15

6.  A high resolution RH map of the bovine major histocompatibility complex.

Authors:  Candice L Brinkmeyer-Langford; Christopher P Childers; Krista L Fritz; Ashley L Gustafson-Seabury; Marian Cothran; Terje Raudsepp; James E Womack; Loren C Skow
Journal:  BMC Genomics       Date:  2009-04-24       Impact factor: 3.969

7.  Application of dissociation curve analysis to radiation hybrid panel marker scoring: generation of a map of river buffalo (B. bubalis) chromosome 20.

Authors:  Kelli J Kochan; M Elisabete J Amaral; Richa Agarwala; Alejandro A Schäffer; Penny K Riggs
Journal:  BMC Genomics       Date:  2008-11-17       Impact factor: 3.969

8.  Integrating linkage and radiation hybrid mapping data for bovine chromosome 15.

Authors:  Warren M Snelling; Mathieu Gautier; John W Keele; Timothy P L Smith; Roger T Stone; Gregory P Harhay; Gary L Bennett; Naoya Ihara; Akiko Takasuga; Haruko Takeda; Yoshikazu Sugimoto; André Eggen
Journal:  BMC Genomics       Date:  2004-10-08       Impact factor: 3.969

9.  A 4 Mb high resolution BAC contig on bovine chromosome 1q12 and comparative analysis with human chromosome 21q22.

Authors:  Cord Drögemüller; Anne Wöhlke; Tosso Leeb; Ottmar Distl
Journal:  Comp Funct Genomics       Date:  2005

10.  Construction of two whole genome radiation hybrid panels for dromedary (Camelus dromedarius): 5000RAD and 15000RAD.

Authors:  Polina L Perelman; Rudolf Pichler; Anna Gaggl; Denis M Larkin; Terje Raudsepp; Fahad Alshanbari; Heather M Holl; Samantha A Brooks; Pamela A Burger; Kathiravan Periasamy
Journal:  Sci Rep       Date:  2018-01-31       Impact factor: 4.379

  10 in total

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