Literature DB >> 10572642

Construct for high-level expression and low misincorporation of lysine for arginine during expression of pET-encoded eukaryotic proteins in Escherichia coli.

J You1, R E Cohen, C M Pickart.   

Abstract

The arginine codon AGA is rarely used in E. coli but is common in eukaryotic genes. Prior studies have shown that the low level of tRNA(UCUArg) can lead to low expression and misincorporation of lysine for arginine, during expression of genes containing AGA codons in E. coli. The chloramphenicol-selectable plasmid pJY2 is designed to facilitate the expression of such genes cloned into pET vectors: it encodes T7 lysozyme (to depress constitutive expression of the cloned gene) and tRNA(UCUArg) (to suppress lysine misincorporation at AGA codons). Using pJY2, we observed robust and translationally faithful expression of mutant ubiquitin genes in which 14% (11 out of 76) of the total codons were AGA. Competent BL21(DE3)pJY2 cells can be used to suppress lysine misincorporation and achieve high-level expression of pET-encoded target genes without modification of AGA codons in the target gene sequence.

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Year:  1999        PMID: 10572642     DOI: 10.2144/99275st01

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  13 in total

1.  Polyubiquitination is required for US11-dependent movement of MHC class I heavy chain from endoplasmic reticulum into cytosol.

Authors:  C E Shamu; D Flierman; H L Ploegh; T A Rapoport; V Chau
Journal:  Mol Biol Cell       Date:  2001-08       Impact factor: 4.138

2.  Involvement of the DNA repair protein hHR23 in p53 degradation.

Authors:  Sandra Glockzin; Francois-Xavier Ogi; Arnd Hengstermann; Martin Scheffner; Christine Blattner
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

3.  Pilot studies on the parallel production of soluble mouse proteins in a bacterial expression system.

Authors:  Nathan P Cowieson; Pawel Listwan; Mareike Kurz; Anna Aagaard; Timothy Ravasi; Christine Wells; Thomas Huber; David A Hume; Bostjan Kobe; Jennifer L Martin
Journal:  J Struct Funct Genomics       Date:  2005

4.  Specific interactions by the N-terminal arm inhibit self-association of the AraC dimerization domain.

Authors:  John E Weldon; Robert F Schleif
Journal:  Protein Sci       Date:  2006-12       Impact factor: 6.725

Review 5.  Protein production and purification.

Authors:  Susanne Gräslund; Pär Nordlund; Johan Weigelt; B Martin Hallberg; James Bray; Opher Gileadi; Stefan Knapp; Udo Oppermann; Cheryl Arrowsmith; Raymond Hui; Jinrong Ming; Sirano dhe-Paganon; Hee-won Park; Alexei Savchenko; Adelinda Yee; Aled Edwards; Renaud Vincentelli; Christian Cambillau; Rosalind Kim; Sung-Hou Kim; Zihe Rao; Yunyu Shi; Thomas C Terwilliger; Chang-Yub Kim; Li-Wei Hung; Geoffrey S Waldo; Yoav Peleg; Shira Albeck; Tamar Unger; Orly Dym; Jaime Prilusky; Joel L Sussman; Ray C Stevens; Scott A Lesley; Ian A Wilson; Andrzej Joachimiak; Frank Collart; Irina Dementieva; Mark I Donnelly; William H Eschenfeldt; Youngchang Kim; Lucy Stols; Ruying Wu; Min Zhou; Stephen K Burley; J Spencer Emtage; J Michael Sauder; Devon Thompson; Kevin Bain; John Luz; Tarun Gheyi; Fred Zhang; Shane Atwell; Steven C Almo; Jeffrey B Bonanno; Andras Fiser; Sivasubramanian Swaminathan; F William Studier; Mark R Chance; Andrej Sali; Thomas B Acton; Rong Xiao; Li Zhao; Li Chung Ma; John F Hunt; Liang Tong; Kellie Cunningham; Masayori Inouye; Stephen Anderson; Heleema Janjua; Ritu Shastry; Chi Kent Ho; Dongyan Wang; Huang Wang; Mei Jiang; Gaetano T Montelione; David I Stuart; Raymond J Owens; Susan Daenke; Anja Schütz; Udo Heinemann; Shigeyuki Yokoyama; Konrad Büssow; Kristin C Gunsalus
Journal:  Nat Methods       Date:  2008-02       Impact factor: 28.547

Review 6.  You're one in a googol: optimizing genes for protein expression.

Authors:  Mark Welch; Alan Villalobos; Claes Gustafsson; Jeremy Minshull
Journal:  J R Soc Interface       Date:  2009-03-11       Impact factor: 4.118

7.  Different HECT domain ubiquitin ligases employ distinct mechanisms of polyubiquitin chain synthesis.

Authors:  Min Wang; Cecile M Pickart
Journal:  EMBO J       Date:  2005-12-08       Impact factor: 11.598

8.  Structural determination of biomolecular interfaces by nuclear magnetic resonance of proteins with reduced proton density.

Authors:  Fabien Ferrage; Kaushik Dutta; Alexander Shekhtman; David Cowburn
Journal:  J Biomol NMR       Date:  2010-04-07       Impact factor: 2.835

9.  Structure of an engineered intein reveals thiazoline ring and provides mechanistic insight.

Authors:  C Seth Pearson; Reza Nemati; Binbin Liu; Jing Zhang; Matteo Scalabrin; Zhong Li; Hongmin Li; Dan Fabris; Marlene Belfort; Georges Belfort
Journal:  Biotechnol Bioeng       Date:  2019-01-08       Impact factor: 4.530

10.  Key role of Ubc5 and lysine-63 polyubiquitination in viral activation of IRF3.

Authors:  Wenwen Zeng; Ming Xu; Siqi Liu; Lijun Sun; Zhijian J Chen
Journal:  Mol Cell       Date:  2009-10-23       Impact factor: 17.970

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