Literature DB >> 10572139

Cellobiose-6-phosphate hydrolase (CelF) of Escherichia coli: characterization and assignment to the unusual family 4 of glycosylhydrolases.

J Thompson1, S B Ruvinov, D I Freedberg, B G Hall.   

Abstract

The gene celF of the cryptic cel operon of Escherichia coli has been cloned, and the encoded 6-phospho-beta-glucosidase (cellobiose-6-phosphate [6P] hydrolase; CelF [EC 3.2.1.86]) has been expressed and purified in a catalytically active state. Among phospho-beta-glycosidases, CelF exhibits unique requirements for a divalent metal ion and NAD(+) for activity and, by sequence alignment, is assigned to family 4 of the glycosylhydrolase superfamily. CelF hydrolyzed a variety of P-beta-glucosides, including cellobiose-6P, salicin-6P, arbutin-6P, gentiobiose-6P, methyl-beta-glucoside-6P, and the chromogenic analog, p-nitrophenyl-beta-D-glucopyranoside-6P. In the absence of a metal ion and NAD(+), purified CelF was rapidly and irreversibly inactivated. The functional roles of the cofactors have not been established, but NAD(+) appears not to be a reactant and there is no evidence for reduction of the nucleotide during substrate cleavage. In solution, native CelF exists as a homotetramer (M(w), approximately 200,000) composed of noncovalently linked subunits, and this oligomeric structure is maintained independently of the presence or absence of a metal ion. The molecular weight of the CelF monomer (M(r), approximately 50,000), estimated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, is in agreement with that calculated from the amino acid sequence of the polypeptide (450 residues; M(r) = 50,512). Comparative sequence alignments provide tentative identification of the NAD(+)-binding domain (residues 7 to 40) and catalytically important glutamyl residues (Glu(112) and Glu(356)) of CelF.

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Year:  1999        PMID: 10572139      PMCID: PMC103698     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  45 in total

1.  Crystallization and preliminary X-ray analysis of the 6-phospho-alpha-glucosidase from Bacillus subtilis.

Authors:  A Varrot; H Yamamoto; J Sekiguchi; J Thompson; G J Davies
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2.  Mechanisms of activation of the cryptic cel operon of Escherichia coli K12.

Authors:  L L Parker; B G Hall
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

Review 3.  The bacterial phosphoenolpyruvate: glycose phosphotransferase system.

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4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

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5.  Purification and analysis of the structure of alpha-galactosidase from Escherichia coli.

Authors:  Y Nagao; T Nakada; M Imoto; T Shimamoto; S Sakai; M Tsuda; T Tsuchiya
Journal:  Biochem Biophys Res Commun       Date:  1988-02-29       Impact factor: 3.575

6.  Protein phosphorylation regulates transcription of the beta-glucoside utilization operon in E. coli.

Authors:  O Amster-Choder; F Houman; A Wright
Journal:  Cell       Date:  1989-09-08       Impact factor: 41.582

7.  A fourth Escherichia coli gene system with the potential to evolve beta-glucoside utilization.

Authors:  L L Parker; B G Hall
Journal:  Genetics       Date:  1988-07       Impact factor: 4.562

8.  Characterization and nucleotide sequence of the cryptic cel operon of Escherichia coli K12.

Authors:  L L Parker; B G Hall
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

9.  Maintenance of the cellobiose utilization genes of Escherichia coli in a cryptic state.

Authors:  B G Hall; P W Betts; M Kricker
Journal:  Mol Biol Evol       Date:  1986-09       Impact factor: 16.240

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Authors:  K Schnetz; B Rak
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  10 in total

1.  α-Galacturonidase(s): a new class of Family 4 glycoside hydrolases with strict specificity and a unique CHEV active site motif.

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Authors:  H Yamamoto; M Serizawa; J Thompson; J Sekiguchi
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4.  Characterization of an operon required for growth on cellobiose in Clostridioides difficile.

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6.  Evolution and biochemistry of family 4 glycosidases: implications for assigning enzyme function in sequence annotations.

Authors:  Barry G Hall; Andreas Pikis; John Thompson
Journal:  Mol Biol Evol       Date:  2009-07-22       Impact factor: 16.240

7.  The sim operon facilitates the transport and metabolism of sucrose isomers in Lactobacillus casei ATCC 334.

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Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

8.  The chbG gene of the chitobiose (chb) operon of Escherichia coli encodes a chitooligosaccharide deacetylase.

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Journal:  J Bacteriol       Date:  2012-07-13       Impact factor: 3.490

9.  Characterization of two-step deglycosylation via oxidation by glycoside oxidoreductase and defining their subfamily.

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10.  Analysis of Lactobacillus rhamnosus GG in Mulberry Galacto-Oligosaccharide Medium by Comparative Transcriptomics and Metabolomics.

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  10 in total

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