Literature DB >> 10571058

Identification of proteins that interact with NF-YA.

K Yamada1, H Osawa, D K Granner.   

Abstract

We used the yeast two-hybrid system to show that the serum response factor (SRF) and zinc-fingers and homeobox 1 (ZHXI) proteins interact with the A subunit of nuclear factor-Y (NF-YA). GST pulldown assays revealed that both proteins interact specifically with NF-YA in vitro. Amino acids located between 272 and 564, a region that contains two homeodomains, are required for the interaction of ZHX1 with NF-YA. Two different domains of NF-YA, a glutamine-rich region and a serine/threonine-rich region, are necessary for the interactions with ZHX1 and SRF, respectively.

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Year:  1999        PMID: 10571058     DOI: 10.1016/s0014-5793(99)01311-3

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  14 in total

1.  Zinc-fingers and homeoboxes (ZHX) 2, a novel member of the ZHX family, functions as a transcriptional repressor.

Authors:  Hiroko Kawata; Kazuya Yamada; Zhangfei Shou; Tetsuya Mizutani; Takashi Yazawa; Miki Yoshino; Toshio Sekiguchi; Takashi Kajitani; Kaoru Miyamoto
Journal:  Biochem J       Date:  2003-08-01       Impact factor: 3.857

2.  Solution NMR structures of homeodomains from human proteins ALX4, ZHX1, and CASP8AP2 contribute to the structural coverage of the Human Cancer Protein Interaction Network.

Authors:  Xianzhong Xu; Surya V S R K Pulavarti; Alexander Eletsky; Yuanpeng Janet Huang; Thomas B Acton; Rong Xiao; John K Everett; Gaetano T Montelione; Thomas Szyperski
Journal:  J Struct Funct Genomics       Date:  2014-06-19

Review 3.  The animal nuclear factor Y: an enigmatic and important heterotrimeric transcription factor.

Authors:  Guilin Li; Hang Zhao; Lijun Wang; Ying Wang; Xingqi Guo; Baohua Xu
Journal:  Am J Cancer Res       Date:  2018-07-01       Impact factor: 6.166

Review 4.  Zinc fingers and homeoboxes family in human diseases.

Authors:  Y Liu; D Ma; C Ji
Journal:  Cancer Gene Ther       Date:  2015-04-10       Impact factor: 5.987

5.  Knockdown of AKR1C3 exposes a potential epigenetic susceptibility in prostate cancer cells.

Authors:  Craig L Doig; Sebastiano Battaglia; Farhat L Khanim; Christopher M Bunce; Moray J Campbell
Journal:  J Steroid Biochem Mol Biol       Date:  2015-09-30       Impact factor: 4.292

6.  Bone biology-related gingival transcriptome in ageing and periodontitis in non-human primates.

Authors:  Subramanya N Pandruvada; Octavio A Gonzalez; Sreenatha Kirakodu; Sudha Gudhimella; Arnold J Stromberg; Jeffrey L Ebersole; Luis Orraca; Janis Gonzalez-Martinez; Michael J Novak; Sarandeep S Huja
Journal:  J Clin Periodontol       Date:  2016-04-06       Impact factor: 8.728

7.  Novel structural features in two ZHX homeodomains derived from a systematic study of single and multiple domains.

Authors:  Louise E Bird; Jingshan Ren; Joanne E Nettleship; Gert E Folkers; Raymond J Owens; David K Stammers
Journal:  BMC Struct Biol       Date:  2010-05-28

8.  Analysis of zinc-fingers and homeoboxes (ZHX)-1-interacting proteins: molecular cloning and characterization of a member of the ZHX family, ZHX3.

Authors:  Kazuya Yamada; Hiroko Kawata; Zhangfei Shou; Satoko Hirano; Tetsuya Mizutani; Takashi Yazawa; Toshio Sekiguchi; Miki Yoshino; Takashi Kajitani; Kaoru Miyamoto
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

9.  The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding.

Authors:  Karl Kornacker; Morten Beck Rye; Tony Håndstad; Finn Drabløs
Journal:  BMC Bioinformatics       Date:  2012-07-24       Impact factor: 3.169

10.  Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships.

Authors:  Ken Daigoro Yokoyama; Uwe Ohler; Gregory A Wray
Journal:  Nucleic Acids Res       Date:  2009-05-29       Impact factor: 16.971

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