Literature DB >> 10569931

Importance of F1-ATPase residue alpha-Arg-376 for catalytic transition state stabilization.

S Nadanaciva1, J Weber, S Wilke-Mounts, A E Senior.   

Abstract

The functional role of essential residue alpha-Arg-376 in the catalytic site of F1-ATPase was studied. The mutants alpha R376C, alpha R376Q, and alpha R376K were constructed, and combined with the mutation beta Y331W, to investigate catalytic site nucleotide-binding parameters, and to assess catalytic transition state formation by measurement of MgADP-fluoroaluminate binding. Each mutation caused large impairment of ATP synthesis and hydrolysis. Despite the apparent proximity of alpha-Arg-376 to bound nucleoside di- and triphosphate in published X-ray structures, the mutations had little effect on MgADP or MgATP binding affinities, particularly at the highest affinity catalytic site, site 1. Both Cys and Gln mutants abolished transition state formation, demonstrating that alpha-Arg-376 is normally involved at this step of catalysis. A model of the F1-ATPase catalytic transition state structure is presented and discussed. The Lys mutant, although severely impaired, supported transition state formation, suggesting that an additional essential role for the alpha-Arg-376 guanidinium group exists, likely in alpha/beta conformational signal transmission required for steady-state catalysis. Parallels between alpha-Arg-376 and GAP/G-protein "arginine finger" residues are evident.

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Year:  1999        PMID: 10569931     DOI: 10.1021/bi9917683

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  34 in total

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Journal:  J Biol Chem       Date:  2012-03-08       Impact factor: 5.157

2.  The missing link between thermodynamics and structure in F1-ATPase.

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Journal:  Biophys J       Date:  2003-08       Impact factor: 4.033

Review 4.  Inhibitory Mg-ADP-fluoroaluminate complexes bound to catalytic sites of F(1)-ATPases: are they ground-state or transition-state analogs?

Authors:  W S Allison; H Ren; C Dou
Journal:  J Bioenerg Biomembr       Date:  2000-10       Impact factor: 2.945

Review 5.  Biological Nanomotors with a Revolution, Linear, or Rotation Motion Mechanism.

Authors:  Peixuan Guo; Hiroyuki Noji; Christopher M Yengo; Zhengyi Zhao; Ian Grainge
Journal:  Microbiol Mol Biol Rev       Date:  2016-01-27       Impact factor: 11.056

Review 6.  Understanding helicases as a means of virus control.

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Journal:  Curr Pharm Des       Date:  2006       Impact factor: 3.116

7.  Structural similarity between the flagellar type III ATPase FliI and F1-ATPase subunits.

Authors:  Katsumi Imada; Tohru Minamino; Aiko Tahara; Keiichi Namba
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-03       Impact factor: 11.205

Review 8.  The nuts and bolts of ring-translocase structure and mechanism.

Authors:  Artem Y Lyubimov; Melania Strycharska; James M Berger
Journal:  Curr Opin Struct Biol       Date:  2011-02-01       Impact factor: 6.809

9.  The catalytic transition state in ATP synthase.

Authors:  A E Senior; J Weber; S Nadanaciva
Journal:  J Bioenerg Biomembr       Date:  2000-10       Impact factor: 2.945

10.  The arginine finger of bacteriophage T7 gene 4 helicase: role in energy coupling.

Authors:  Donald J Crampton; Shenyuan Guo; Donald E Johnson; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-30       Impact factor: 11.205

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